Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31]
340 sequences; 41,626,055 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 3e-26
seq113 111 4e-19
>seq1
Length=2331425
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| ||||| || | | || | |||||
Sbjct 482153 AGAACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCC 482212
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || || || || |||||||| || |||||||| ||||||||||||
Sbjct 482213 TCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCT 482272
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| || ||||| || || |||| ||| || || | ||||| |||
Sbjct 482273 TGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTC 482332
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| |||||| | ||| | |||||
Sbjct 482333 TTGCCTGTCAGAGTTTTGACGAAGATCTGCAT 482364
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| |||||||| | | ||||| || ||
Sbjct 482381 AGAACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCC 482440
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || ||||| || || || || || ||||| ||||| || ||||| ||
Sbjct 482441 TCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCC 482500
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| ||| ||| ||||||||||| || | || || || | ||||||||||
Sbjct 482501 TGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTC 482560
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 482561 TTGCCGGTCAATGTCTT 482577
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| || ||| || || || | ||||||||| | |||||| | ||| || || | ||
Sbjct 481933 GTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAATTG 481992
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
|||||| || ||||| || || || ||||| || ||||| || ||||| || || |||||
Sbjct 481993 CTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTT 482052
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||||||| || || || || || | || || || |||||||||||||| |||||
Sbjct 482053 CGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGT 482112
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
|||||| || | ||| | ||||||
Sbjct 482113 CAAAGTCTTCACGAAGATTTGCAT 482136
Score = 104 bits (114), Expect = 6e-17
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||||| || || |||| ||||| |||| | ||| | |||||
Sbjct 482609 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCC 482668
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
|| |||||||| |||||||||||||| |||||||||||||| || ||
Sbjct 482669 TCAAGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTCGGGAGGGAT 482715
>seq113
Length=2004859
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567
||||| |||||| || || || | ||||| || | | ||| | ||| || || |||
Sbjct 833322 AGGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGC 833381
Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627
||||||||||| || || | || |||||||| || || ||||| |||||||| || |||
Sbjct 833382 TGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATC 833441
Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687
|| ||| ||| ||||| ||||| || | ||| || || | || || ||||| |||
Sbjct 833442 TTCGCCTTGACATTGTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCC 833501
Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713
|| | || || | ||| | ||||||
Sbjct 833502 GTGAGCGTCTTGACGAAAATTTGCAT 833527
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567
|| || ||||| || || || || | || ||||||| | ||| | ||| || || |||
Sbjct 833605 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 833664
Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627
||||| || |||||||| | || || ||||| || |||||||| |||||||| ||||||
Sbjct 833665 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATC 833724
Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687
||| || || ||||||||||| || | || || || | || || ||||| ||
Sbjct 833725 TTTGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCA 833784
Query 225688 GT 225689
||
Sbjct 833785 GT 833786
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || ||||| || || ||||| ||||| || | ||||| || | | ||
Sbjct 834101 CGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTA 834160
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
| ||||||||| ||||||||||| || ||||| || || |||||||||||||| ||
Sbjct 834161 CGCCCATCTTCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGGGAT 834216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192526005035960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |