Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq113 158 9e-34 seq1 141 7e-29 seq69 87.8 1e-12 >seq113 Length=2004859 Score = 158 bits (174), Expect = 9e-34 Identities = 162/210 (77%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 |||||||||| ||||||||||| || |||||||| || | || |||| |||| || | Sbjct 833320 CCAGGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGA 833379 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 |||||||||| ||||| ||||| ||||| || || | || | ||| ||||| ||| | Sbjct 833380 GCTGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAA 833439 Query 44250 TCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | || ||||| | ||||| ||||| | ||||| ||||| Sbjct 833440 TCTTCGCCTTGACATTGT--CGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTT 833497 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| ||||| ||||| |||||||| Sbjct 833498 TCCCGTGAGCGTCTTGACGAAAATTTGCAT 833527 Score = 138 bits (152), Expect = 8e-28 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || ||||| ||||||| || |||| |||| || |||||||| || || || Sbjct 833619 CTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAA 833678 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||||||| || | || | ||| ||||| ||| ||||| ||||| | || Sbjct 833679 GATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT-TGCTTTGACGT 833737 Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | |||||||||| || || ||||| | ||||| ||||| || ||||||||||| | Sbjct 833738 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGA 833797 Query 44325 CGAAGATTTGCAT 44337 | ||||| ||||| Sbjct 833798 CAAAGATCTGCAT 833810 Score = 120 bits (132), Expect = 2e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| ||| |||||| || ||||||||||| | || ||| | || | Sbjct 833883 CACCAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTT 833942 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| ||||| |||||||| ||||| || || | || | ||| ||||| ||| Sbjct 833943 CCAGCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCT 834002 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | ||||| || | ||| || || |||| || || |||| Sbjct 834003 GGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCT 834062 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || || ||||| || ||||| Sbjct 834063 TTCCCGTCAGTGTTTTGACGAAAATCTGCAT 834093 >seq1 Length=2331425 Score = 141 bits (156), Expect = 7e-29 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 ||| |||||| ||||||||||| || || |||||||| | | ||| |||| |||| Sbjct 481929 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 481988 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||||||||||||| | |||||||| || | ||| | || ||||| ||| | Sbjct 481989 ATTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 482048 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||||| ||||| | | || || || | || || || |||| ||| |||||||||| Sbjct 482049 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 482108 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | |||||||||||||||||||| Sbjct 482109 CCGTCAAAGTCTTCACGAAGATTTGCAT 482136 Score = 116 bits (128), Expect = 3e-21 Identities = 156/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGT 44186 || ||||| ||||| |||||| |||||||||||||| | ||||| || |||| | Sbjct 482384 ACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTT--CGGCCGTCCT 482441 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| ||||| || || | ||||||||||| | ||| | || ||||| ||| Sbjct 482442 CGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCT 482501 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | |||||||||| || || || |||| ||| ||||| Sbjct 482502 GAATCTTTGCCTTGACATTGT--CGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGT 482559 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | |||||||| || || ||||| Sbjct 482560 CTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| ||||| |||||| ||||||||||| || | || ||| | || || Sbjct 482156 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCCTCA 482215 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||| || | ||| || ||||| | || | |||||||| || Sbjct 482216 AGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGG 482275 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || ||| ||| | | | || || |||| |||||| || || | || || ||||| Sbjct 482276 ATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTG 482335 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || || || |||||||| |||||| Sbjct 482336 CCTGTCAGAGTTTTGACGAAGATCTGCATG 482365 >seq69 Length=731732 Score = 87.8 bits (96), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||||||||||||||| ||| ||| ||| | || ||| Sbjct 268744 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCC 268803 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||||||| ||||| ||||||| ||||||||| || | ||| Sbjct 268804 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 268844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988908289780