Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31]
340 sequences; 41,626,055 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq113 158 9e-34
seq1 141 7e-29
seq69 87.8 1e-12
>seq113
Length=2004859
Score = 158 bits (174), Expect = 9e-34
Identities = 162/210 (77%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189
|||||||||| ||||||||||| || |||||||| || | || |||| |||| || |
Sbjct 833320 CCAGGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGA 833379
Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249
|||||||||| ||||| ||||| ||||| || || | || | ||| ||||| ||| |
Sbjct 833380 GCTGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAA 833439
Query 44250 TCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| || ||| | || ||||| | ||||| ||||| | ||||| |||||
Sbjct 833440 TCTTCGCCTTGACATTGT--CGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTT 833497
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| ||||| ||||| ||||||||
Sbjct 833498 TCCCGTGAGCGTCTTGACGAAAATTTGCAT 833527
Score = 138 bits (152), Expect = 8e-28
Identities = 148/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| || ||||| ||||||| || |||| |||| || |||||||| || || ||
Sbjct 833619 CTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAA 833678
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||||||||||||| || | || | ||| ||||| ||| ||||| ||||| | ||
Sbjct 833679 GATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT-TGCTTTGACGT 833737
Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | |||||||||| || || ||||| | ||||| ||||| || ||||||||||| |
Sbjct 833738 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGA 833797
Query 44325 CGAAGATTTGCAT 44337
| ||||| |||||
Sbjct 833798 CAAAGATCTGCAT 833810
Score = 120 bits (132), Expect = 2e-22
Identities = 154/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186
||||| ||||||| ||| |||||| || ||||||||||| | || ||| | || |
Sbjct 833883 CACCAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTT 833942
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
|||||||||| ||||| |||||||| ||||| || || | || | ||| ||||| |||
Sbjct 833943 CCAGCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCT 834002
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | ||||| || | ||| || || |||| || || ||||
Sbjct 834003 GGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCT 834062
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || || ||||| || |||||
Sbjct 834063 TTCCCGTCAGTGTTTTGACGAAAATCTGCAT 834093
>seq1
Length=2331425
Score = 141 bits (156), Expect = 7e-29
Identities = 156/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189
||| |||||| ||||||||||| || || |||||||| | | ||| |||| ||||
Sbjct 481929 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 481988
Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249
||||||||||||||||| | |||||||| || | ||| | || ||||| ||| |
Sbjct 481989 ATTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 482048
Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309
||||| ||||| | | || || || | || || || |||| ||| ||||||||||
Sbjct 482049 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 482108
Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | ||||||||||||||||||||
Sbjct 482109 CCGTCAAAGTCTTCACGAAGATTTGCAT 482136
Score = 116 bits (128), Expect = 3e-21
Identities = 156/213 (73%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGT 44186
|| ||||| ||||| |||||| |||||||||||||| | ||||| || |||| |
Sbjct 482384 ACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTT--CGGCCGTCCT 482441
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| ||||| || || | ||||||||||| | ||| | || ||||| |||
Sbjct 482442 CGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCT 482501
Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||| || ||| | |||||||||| || || || |||| ||| |||||
Sbjct 482502 GAATCTTTGCCTTGACATTGT--CGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGT 482559
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || | |||||||| || || |||||
Sbjct 482560 CTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| ||||| |||||| ||||||||||| || | || ||| | || ||
Sbjct 482156 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCCTCA 482215
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| |||||||| || | ||| || ||||| | || | |||||||| ||
Sbjct 482216 AGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGG 482275
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|| ||| ||| | | | || || |||| |||||| || || | || || |||||
Sbjct 482276 ATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTG 482335
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || || || |||||||| ||||||
Sbjct 482336 CCTGTCAGAGTTTTGACGAAGATCTGCATG 482365
>seq69
Length=731732
Score = 87.8 bits (96), Expect = 1e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| |||||||||||||||||| ||| ||| ||| | || |||
Sbjct 268744 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCC 268803
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|||||||| ||||| ||||||| ||||||||| || | |||
Sbjct 268804 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 268844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988908289780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |