Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq32 179 4e-40 seq925 145 8e-30 seq179 134 1e-26 seq247 100 3e-16 >seq32 Length=1481398 Score = 179 bits (198), Expect = 4e-40 Identities = 291/419 (69%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||||||||||||||| || || |||||||||| || ||||| || || ||| Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 ||||||| || ||||| || |||||||| | ||| ||||| | ||| ||||||||| Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 ||||||||||| || ||||| | ||||| || | || ||||| ||| | || | | | Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 |||| ||||||||| | |||| || ||||| |||| |||||| || || ||| Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 ||||| | || | | | ||||| | || | || || |||||| || | Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||| ||||||| || || |||||||| || ||||| || || ||| | || || Sbjct 1083977 GAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCC 1083918 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 || | || || ||||| | | || | ||| | || || ||||| || ||||| || Sbjct 1083917 TCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATC 1083859 >seq925 Length=43645 Score = 145 bits (160), Expect = 8e-30 Identities = 249/359 (69%), Gaps = 2/359 (1%) Strand=Plus/Plus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 || ||| |||||||| || | ||||| |||| ||||||||| ||||| | || | Sbjct 13681 CATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGA 13740 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | || |||||| || | |||||| |||||||| ||||||||||| || || ||||| Sbjct 13741 TAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAA 13800 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| || || || ||| |||| || || | |||||||| || |||| || | || Sbjct 13801 GAAAATCCCTTCTACGCATGCGAAAGCCAACAATCGTTCACCGAACGTTCTTTCCTCGTC 13860 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | ||||| || |||| || ||||||| ||| | |||| || ||||| || || Sbjct 13861 AGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCATCGC 13920 Query 17200 CTTAAATAATTTCTCTT-TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258 || ||| | ||| ||| |||| | ||| | ||||| | ||||| | || | Sbjct 13921 ATTGAAT-AGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGAAT 13979 Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 ||| ||| ||||| | ||| || || | |||||| ||||| ||| | ||||||||| Sbjct 13980 ACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTCC 14038 >seq179 Length=47363 Score = 134 bits (148), Expect = 1e-26 Identities = 311/464 (67%), Gaps = 16/464 (3%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||||||||||| ||| ||||| || || |||||||||||||| || || || Sbjct 9370 AACAAAAGACATGCGAAGTCGGTATGTAGACCTTCATCTCTGCTGATAAGCTCATTGGAG 9311 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||| || |||||| || |||||||| | |||||| || || ||||| || ||| Sbjct 9310 AAAGTCAATCCTGGCATCACACCACGTTTCTTCAGCCAAAAAATGGCCGCGAAGGAACCA 9251 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCG--TTC----GGCGTACGTC 17128 ||||| || || || || ||| | ||||| || | | | ||| ||| || Sbjct 9250 GAAAAAAAGATGCCTTCCACGCAGGCAAAGGCTACGAGGTGGCTTCCAAAGGCAACCGCG 9191 Query 17129 GCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATC 17188 | |||| | ||||||||| |||| || || ||| || ||||| ||||| Sbjct 9190 GAATCTTCG------ATCCATTTCAATGCCCAATCCGCCTTTCTTTTGATGCACTCCATT 9137 Query 17189 GTTTCTATGGCCTTAAATA-AT-TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGA 17246 ||||| | || | || | || | || || || || ||| | ||| || |||| Sbjct 9136 GTTTCAAGCGCATCGAAGAGATGTAATCGTTCTCGGGT--GTCTGCAACATAGGTGTCGA 9079 Query 17247 TGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGC 17306 |||||| ||| ||||||| || | ||| || || |||||||| |||||||| Sbjct 9078 TGAGTAAAGAATACGTTTCGGAATGGACGTTTTCGATCATAATCTGAAAACCGTAAAACG 9019 Query 17307 ATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGA 17366 | || |||||| || ||| |||| || | || ||||||||||||| Sbjct 9018 AGCGAGCTTCCAAAGGCCCAATTTCGCAACAGAAGTTTTGTACAAGGTTTTCGTTCACGA 8959 Query 17367 TGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAA 17410 ||||||| ||| || ||||| || | | ||| | |||||| Sbjct 8958 TGCCGTCAGACGCAGCAAAAAATGCAAGGACATGGGTGATGAAA 8915 >seq247 Length=45445 Score = 100 bits (110), Expect = 3e-16 Identities = 157/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||||| || || || ||| | ||| |||||||||||||| |||||||| ||| Sbjct 37324 AACAATAGACAGGCAAAGTCCGTATGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAA 37383 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || || ||||| || |||||||| | |||||| | || || ||||| || Sbjct 37384 AAAGTTAAGCCTGGCAT-AAGCCCCGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCG 37442 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || ||||| || || || || | ||||| || | || ||||||| | | | ||| | Sbjct 37443 GAGAAGAAAATGCCTTCCACACACGCAAAGGCAACCAAACGTTCGG-GAAAGAGGCGGAT 37501 Query 17135 TTG-TTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCT 17174 | | | | |||||||||| |||| | ||||||| || Sbjct 37502 TGGATCATTAATCCATTTCAATGCCCAGTTCGCTTTTTCCT 37542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517476417091920