Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq9278 84.2 2e-11 seq9205 84.2 2e-11 >seq9278 Length=305 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| ||| |||||||| ||||||||||| || | || || | ||||||| ||||| Sbjct 192 ATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTG 251 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||||||||| | || | | ||| |||||| ||| | ||| |||||||| Sbjct 252 CTTGCCCGCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 302 >seq9205 Length=338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| ||| |||||||| ||||||||||| || | || || || ||||||| ||||| Sbjct 225 ATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGCTG 284 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| | || | | |||||||||| ||| | || |||||||| Sbjct 285 CTTGCCCGCGAAGATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTC 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422204165638904