Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq32 289 3e-73
seq1000 152 5e-32
seq247 143 3e-29
seq9840 98.7 1e-15
seq106 96.9 4e-15
seq451 82.4 8e-11
>seq32
Length=1481398
Score = 289 bits (320), Expect = 3e-73
Identities = 408/571 (71%), Gaps = 9/571 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| ||||||||||| ||||| | ||||| |||||||
Sbjct 1082603 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCGTTTTGGACTGCAGAGGAAATGGACCTC 1082544
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| || || | |||||| ||| | ||||||||||||||||||||||||
Sbjct 1082543 TCGAAAGATATTCATGACTGGACCACCCGCCTTAACGACAACGAGCGCCATTTCATCTCC 1082484
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || || || ||||| ||| || || || ||||||||||| || ||||||||
Sbjct 1082483 CATGTCCTCGCTTTCTTCGCAGCCTCGGATGGTATTGTCAACGAGAACCTTGTCGAGCGC 1082424
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
|| | | ||||| || || |||||||| || || ||||| ||||| || ||| |||
Sbjct 1082423 TTTTCCAACGAGGTCCAAGTTGCCGAGGCTCGATGTTTCTATGGCTTCCAAATCATGATG 1082364
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA---CGTGCGCTCTTCG 116929
|||||| | ||||| || | ||||||| ||||||||||| || | | | || |
Sbjct 1082363 GAGAACATTCACTCAGAGACGTATTCGCTTCTCATCGACACCTATATCAAGGACGCTGCC 1082304
Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
|| || || | || ||||| | ||||| || ||||| ||||| |||||
Sbjct 1082303 GAACGCGAGTACC---TTTTCGACGCCGTGGAGACCATTCCGTGTGTCAAGCGCAAGGCA 1082247
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049
|| ||||| ||| ||||||| ||| | || | | | || || || ||| |||||||
Sbjct 1082246 GACTGGGCACTGAACTGGATCTCCGACCGACGGTCAACTTTTGGTGAACGCTTGGTGGCG 1082187
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
|| || || || || ||| ||||||| |||||| |||||| |||| || ||| | |||
Sbjct 1082186 TTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGGATGAAG 1082127
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| || ||| | ||||| ||||||||||| ||| |||||||| | | ||||| ||
Sbjct 1082126 AAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGACGAAGGA 1082067
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200
|||| ||||||||| || | || ||||
Sbjct 1082066 ATGCACACCGACTTTGCATGCCTTCTCTTCA 1082036
>seq1000
Length=18647
Score = 152 bits (168), Expect = 5e-32
Identities = 307/453 (68%), Gaps = 12/453 (3%)
Strand=Plus/Plus
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||| |||| ||||| || || ||| || || ||||||||||| || | || |
Sbjct 11965 CACGTGTTGGCTTTTTTTGCGGCGTCCGATGGAATTGTCAACGAGAACTTGCTGGAAAAT 12024
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAG----GCGCGGTGCTTCTACGGCTTTCAGATCGC 116868
|||||||||||||| | |||||| || || ||||| | ||| ||| ||
Sbjct 12025 TTCGCTCAGGAGGT----TTCGCCGAGAGAAGCTTGGGCTTTCTATGCCTTCCAGGTCAT 12080
Query 116869 CATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTC 116928
|| || || || || || |||| || || | |||||||| ||| | | | |
Sbjct 12081 GATTGAAAATGTTCATTCTGAAACATACTCCTTGTTAATCGACACCTACATCACCGATCC 12140
Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988
|||||||| | | || ||||| ||||| || |||| ||||| || |||||||
Sbjct 12141 CAAGGAGAAGGCCTTACTTTTCAACGCTATCGAAACTGTGCCTTGCGTGAAGAAGAAGGC 12200
Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAG--AGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046
|| |||||| || ||||| ||| | | | || || |||| ||||| || ||
Sbjct 12201 AGAATGGGCGATGACATGGATTACCGACCGCTCGCGGTCG--TTCGCTGAGCGTCTTTTG 12258
Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106
|| || | || || ||| | |||||||| ||| || || || || |||||| ||
Sbjct 12259 GCATTTTCCTGTGTTGAAGGCATTTTCTTTTCCGGCTCATTTGCAGCTATCTTTTGGATC 12318
Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166
||||| || || |||||||| || |||||||| ||| || | ||| | ||||||
Sbjct 12319 AAGAAGCGAGGGCTCATGCCTGGATTGACTTTCTCCAATGAATTGATCAGTTGTGACGAG 12378
Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199
|| || ||| |||||| || || |||||||||
Sbjct 12379 GGCCTCCATACCGACTTCGCGTGCTTGCTGTTC 12411
>seq247
Length=45445
Score = 143 bits (158), Expect = 3e-29
Identities = 384/573 (67%), Gaps = 18/573 (3%)
Strand=Plus/Minus
Query 116637 TGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCT-- 116694
|||||| ||||| || ||||| |||||||| ||||||||||| |||||| | || ||
Sbjct 37887 TGTGGCAGATGTATAAGAAGGCGGAGGCGTCATTCTGGACCGTGGAGGAGCTTGATCTTC 37828
Query 116695 GTCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|| || || | ||||||||||| || || || | || | ||||| |
Sbjct 37827 GTTCA--GATTTGGGCGACTGGGAGAACCGTCTGTCGAACGATGACAGACATTTTTTGTC 37770
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
|| ||||||||||| ||||| ||| ||||||||||| ||||| ||| || | || ||
Sbjct 37769 ACATGTGCTGGCCTTCTTCGCAGCCTCGGACGGCATCGTTAACGAAAATTTGCTGGAACG 37710
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGC--CGAGGCGCGGTGCTTCTACGGCTTTCAGATC-GC 116868
||| |||| ||| | ||| | ||||| || ||| ||||| |||| |||
Sbjct 37709 GTTCTCTCAAGAGAT--CGGTCCCTGGGAGGCCCGTGCCTTTTACGG-TTTCCAATCAAT 37653
Query 116869 CATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTC 116928
|| || || || ||||| || ||||||||| | || || || || | || |
Sbjct 37652 GATCGAAAATGTTCACTCCGAGGCATATTCGACCTTGATAGATACCTATATTCG-TGACA 37594
Query 116929 GGA-GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| | ||| | |||| | || ||||| |||||||| || || || || | || || |
Sbjct 37593 GCACGGAACGGGCCCGTCTCTTCAACGCTATCGAGACTATTCCCTGTATCCAGGAAAAAG 37534
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCG-GCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046
| | ||||| || ||||| | | | ||| | ||| ||| || ||||
Sbjct 37533 CGAACTGGGCATTGAAATGGATTAATGATCCAATCCGCCTCTTTC-CCGAACGTTTGGTT 37475
Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106
||||| ||| || || ||| | ||||| || || || || || | |||||| |
Sbjct 37474 GCCTTTGCGTGTGTGGAAGGCATTTTCTTCTCCGGATCGTTTGCAGCAGTCTTTTGGATT 37415
Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166
|||||||| || || ||||| ||| | ||||| ||||| || ||| ||| |||||
Sbjct 37414 AAGAAACG-GGGCTTATGCCAGGCTTAACTTTTTCGAACGAACTAATCAGCAGAGACGAA 37356
Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199
|| || ||| |||||||||||| | |||||
Sbjct 37355 GGACTTCATACGGACTTTGCCTGTCTATTGTTC 37323
>seq9840
Length=425
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| || ||||| | || || || | ||
Sbjct 34 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACGCTGGAAGTGGAGTCTTCC 93
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| ||| |||| || || |||||||| || | || |||
Sbjct 94 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCCGATCAG 153
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||| ||||| || || || |||| || || || || ||||||
Sbjct 154 CAGCGCCTAATTTTCGCCGGCAAGCAACTCGAGGACGGTCGAACTCTTTCTGATTACAAC 213
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | ||||| ||||| ||
Sbjct 214 ATCCAGAAGGAGTCAACGCTCCATCTCGT 242
>seq106
Length=225739
Score = 96.9 bits (106), Expect = 4e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854
||||| | |||||||| || || |||| ||| ||||| |||||||| || | ||||||
Sbjct 79797 ATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACC 79738
Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||| ||||||||||||||| |||||| |||| || ||
Sbjct 79737 CTCAGCGACTACAACATCCAAAAGGAGTCCACTCTCCA 79700
>seq451
Length=165701
Score = 82.4 bits (90), Expect = 8e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854
||||| | ||||| || || || |||| || ||||| ||||| || |||| |||||
Sbjct 12585 ATCCCGCCCGACCAACAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACT 12644
Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||| |||||||||||||||||||||| | || || ||
Sbjct 12645 CTCAGCGACTACAACATCCAGAAGGAGTCGACACTTCA 12682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515150328073440
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