Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9840 118 9e-22 seq106 98.7 9e-16 seq9278 89.7 4e-13 seq9205 89.7 4e-13 seq2021 87.8 2e-12 seq451 84.2 2e-11 >seq9840 Length=425 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || ||||||||||| | ||| || |||||||| || Sbjct 236 TGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCGTCCTCGAGTTGC 177 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| | || || ||||||||||||||||| ||||||||||| || ||| ||| Sbjct 176 TTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTT 117 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | ||| || || | || | ||| ||||||||| Sbjct 116 GCCTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGTCTTGCCGGTC 57 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || |||||||||||||| Sbjct 56 AATGTCTTCACAAAAATCTGCAT 34 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 118575 GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATG 118634 ||||| |||||| ||||| || || || | |||||||| || ||||| || || || Sbjct 425 GTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATC 366 Query 118635 CCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCG 118694 || ||||||||| ||||| || || | |||| || || | | ||||| ||| Sbjct 365 CCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCG 306 Query 118695 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | ||| | || ||||| ||||||||||| || |||||||||||| Sbjct 305 AGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCATG 261 >seq106 Length=225739 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| ||||| |||||||| ||||| | ||||| |||||| Sbjct 79694 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCC 79753 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || || ||| |||| ||||||||||| |||||||| || Sbjct 79754 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGAT 79797 >seq9278 Length=305 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || |||||||| |||||| | ||||||| ||||||||||| || || Sbjct 199 GTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCC 258 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||| | |||||| || || || || |||||||||||||| Sbjct 259 GCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 302 >seq9205 Length=338 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || |||||||| |||||| | |||||| ||||||||||| || || Sbjct 232 GTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCC 291 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| |||| | ||||||||| || || || || ||||||||||| Sbjct 292 GCGAAGATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTC 335 >seq2021 Length=7336 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | || ||| || ||||| |||||||| || ||| ||| ||||| | Sbjct 265 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 206 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||| || || || ||||||| |||||||| || ||||| ||||||||||| || || Sbjct 205 ACTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 146 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | || | || |||| |||||| || | || | ||| || | Sbjct 145 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 86 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| || || || || ||||| Sbjct 85 CCGTCAAAGTCTTCACGAAGATTTGCAT 58 >seq451 Length=165701 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||| ||||| | |||||| |||||| Sbjct 12688 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCCTCG 12629 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || ||||| |||| || ||||| || ||||| || || Sbjct 12628 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGCGGGAT 12585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433773857528248