Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2021 113 5e-20 >seq2021 Length=7336 Score = 113 bits (124), Expect = 5e-20 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 42976 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 43035 |||| || | ||||||||||| |||||||||||||| | || ||| ||| |||| || | Sbjct 265 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 206 Query 43036 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 43095 |||||| || || || ||||| ||||||||||| | || | || |||||| ||| ||| Sbjct 205 ACTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC-TGA 147 Query 43096 TTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 | || | || | | | | ||| || || || || || | |||||| || || Sbjct 146 ATCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTT 87 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| | ||||| || ||||||||||| Sbjct 86 CCCGTCAAAGTCTTCACGAAGATTTGCAT 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571741162282320