Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2021 109 4e-19 >seq2021 Length=7336 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 ||| ||| | || || || ||||| || ||||| || |||| ||| |||| |||| Sbjct 265 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 206 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTA 34301 ||||||| || || || ||||| ||||||||||| || | || |||||| || | Sbjct 205 ACTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 146 Query 34302 TCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGC 34361 |||| ||| | || | | |||| ||| | || ||||| |||| |||||| || || | Sbjct 145 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 86 Query 34362 CGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||| ||||| ||||| ||||| Sbjct 85 CCGTCAAAGTCTTCACGAAGATTTGCAT 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323029893016640