Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq32 163 3e-35 seq247 107 2e-18 >seq32 Length=1481398 Score = 163 bits (180), Expect = 3e-35 Identities = 300/440 (68%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 16226 AACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAA 16285 |||| || ||| || ||||| ||||| || ||||| | ||| || | ||| || ||| Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218 Query 16286 AATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCA 16345 ||||| || || ||||| || || ||||| || ||||| ||||| | |||||| || ||| Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158 Query 16346 GAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttt 16405 ||||||||||| ||||| || || ||||| ||||| | || || || | ||| || | Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098 Query 16406 ttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCT 16465 || | ||||||||| |||||||| ||||| | || | || ||| | ||| Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038 Query 16466 ATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAA 16525 || || | || | | || | ||| || || ||| || || || Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978 Query 16526 CTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCT 16585 |||| |||| ||||| ||||||||||| || ||||| ||||| ||| | | || Sbjct 1083977 GAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCC 1083918 Query 16586 TCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCG 16645 |||| || || |||||| |||||||||| | | ||| ||||| || || ||||| Sbjct 1083917 TCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCT 1083858 Query 16646 CTAGCTGCAAAAAACGCAAG 16665 || ||||| || ||||| Sbjct 1083857 GAGGCCGCAAAGAAAGCAAG 1083838 >seq247 Length=45445 Score = 107 bits (118), Expect = 2e-18 Identities = 123/164 (75%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 16226 AACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAA 16285 |||| || ||| ||||| || ||| | ||||||||| || || |||| ||||| ||| Sbjct 37324 AACAATAGACAGGCAAAGTCCGTATGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAA 37383 Query 16286 AATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCA 16345 || || | |||||||| || || ||||| ||||||||||| | || ||||| || || Sbjct 37384 AAAGTTAAGCCTGGCATAAGCCC-CGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCG 37442 Query 16346 GAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTC 16389 || ||||| || ||||| || ||||| |||||||| || || Sbjct 37443 GAGAAGAAAATGCCTTCCACACACGCAAAGGCAACCAAACGTTC 37486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462450173708400