Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq434 104 5e-17 >seq434 Length=244965 Score = 104 bits (114), Expect = 5e-17 Identities = 215/313 (69%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGG-CAAGATCGTGGAACGAAT 248891 |||||||| |||||| || || |||||| ||| |||| | || ||| || || Sbjct 87930 TTCAAAACTCTGGAGCGTTCCTACCTCCTCCGTATTAATGGTCGAG-TCGCTGAGCGGCC 87872 Query 248892 TCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGAT--GACATAGAGAGCGTG 248949 || |||||| | |||||||| || || || ||||| || | || ||||| | ||| Sbjct 87871 ACAACACATGATTATGCGAGTTGCCGTTGGTATTCAT--GGCTCCGATATAGATCGTGTG 87814 Query 248950 CTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTC 249009 |||||||||||| | ||| ||| || | || ||||| ||||||| || ||| Sbjct 87813 ATCGAGACGTACAACCTGATGTCTGAGCGTCACTTCACGCATGCATCACCGACACTTTTC 87754 Query 249010 AACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069 || ||||| || ||| ||||| ||||| ||||| ||| | |||| |||| ||| Sbjct 87753 AATGCCGGAACTCCCAATCCCCAGCTCAGCTCCTGCTTCCTTGTCTGCATGAAAGATGAC 87694 Query 249070 TCTGTCGACGGCATTTATGACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGG 249128 || | || || ||||| || || ||| || || | || | ||| ||| || || Sbjct 87693 TCGATTGAGGGTATTTACGATAC-CTTGAAAAGTTGTGCCATGATCAGCAAAACGGCTGG 87635 Query 249129 CGGAATCGGTCTC 249141 |||||||||||| Sbjct 87634 AGGAATCGGTCTC 87622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073619275883392