Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq925 174 1e-38 seq32 170 2e-37 seq1000 165 7e-36 seq9840 105 6e-18 seq434 96.9 3e-15 >seq925 Length=43645 Score = 174 bits (192), Expect = 1e-38 Identities = 400/594 (67%), Gaps = 19/594 (3%) Strand=Plus/Minus Query 57571 TTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGT 57630 ||||| |||||||||||||| ||||||| |||||||||| |||||| | ||||| Sbjct 14240 TTTGGGCGATGTACAAAAAGGCTCAAGCATCCTTTTGGACCGCGGAAGAAATCGACCTTC 14181 Query 57631 CTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAG----AGAAATTTTATTAAA 57686 | ||| | | | ||||| | || ||| | | | | ||| | | Sbjct 14180 GTCGGGACGTAACACAATGGGAGGACG---AATTATCCGTGGACGACAGATTCTTTGTTT 14124 Query 57687 CACGTGTTG--GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 | ||| || || ||||| || ||||||||||| || || |||||||| ||||| |||| Sbjct 14123 CTCGTATTCTTGCTTTTTTTGCAGCATCCGATGGAATCGTGAACGAGAACTTGGTGGAAA 14064 Query 57745 GATTTTCACAAGAAGT--GCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 ||| | |||||||| || | ||| || | | ||| ||||| ||||| | Sbjct 14063 ACTTTGCGCAAGAAGTCGGCCCTT--TGGAAGCCCGTTACTTCTACGGCTTTCAGTTCAT 14006 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA 57862 || |||||||| || || ||| |||||||||| | ||||| | || | |||||| | Sbjct 14005 GATCGAAAACGTCCACTCGGAAGTGTATTCGCTTTTGATCGACAGTTATATCAAGGACGA 13946 Query 57863 CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCC-CGCGATCGCCAAGAAGG 57921 | |||| | | | ||| ||||| ||||| |||||||| || ||| | || || | Sbjct 13945 CAACGAAAGAAGCGAACTATTCAATGCGATGGAAACAATTCCTTGCG-TGAAGAAAAAAG 13887 Query 57922 CAGAGTGGTCAATCAAATGGATAA--AAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 |||| ||| | | | ||||||| | | | | | ||||||| || | | | Sbjct 13886 CAGATTGGGCTTTGACTTGGATAACTGACGAGGAAAG--AACGTTCGGTGAACGATTGTT 13829 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || ||||| ||| ||||| || |||||||| ||| || || || || |||||| | Sbjct 13828 GGCTTTCGCATGCGTAGAAGGGATTTTCTTTTCCGGCTCATTCGCCGCGATCTTTTGGTT 13769 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||||| | || ||||||| || || |||| |||||| | || || || || Sbjct 13768 GAAGAAAAGGGGTTTGATGCCAGGACTATCGTTCGCAAACGAGCTTATCAGCCGAGATGA 13709 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153 |||||| || || ||||| ||||| | | |||||||| | ||||| ||||| Sbjct 13708 GGGTCTTCACACAGATTTCGCGTGTATGTTATACTCTCATCTAGTCAACAAACC 13655 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/176 (72%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 58221 GCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTT 58280 ||| |||| ||||| | | ||||||||||| | | ||| || | ||||| | ||| Sbjct 13539 GCCTTACCAGTGGCGCTCATTGGTATGAACAACCACCTCATGACACAATACATAGCCTTT 13480 Query 58281 GTTGCCGACAGACTTTTGCTCGAACTGATTGGAGA--GCGTCATTACAACACGAAAAATC 58338 ||||| || || | ||| ||| || | | ||||| |||||||||| |||| Sbjct 13479 GTTGCAGATCGATTATTGGTCGCGGTGCAGGAACCACGCGTC--TACAACACGACGAATC 13422 Query 58339 CGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAAA 58394 | |||||||| ||| | ||||||| | ||||| |||||||| |||||||||||| Sbjct 13421 CATTTGATTTCATGGACATGATCTCTTTGGAGGGGAAGACAAATTTTTTCGAAAAA 13366 >seq32 Length=1481398 Score = 170 bits (188), Expect = 2e-37 Identities = 381/565 (67%), Gaps = 13/565 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || ||||||||||| | || ||| | ||||| Sbjct 1082603 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCGTTTTGGACTGCAGAGGAAATGGACCTC 1082544 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGAGAGAAATTTTATTAAA 57686 || || ||| | || ||| ||| | || || ||| | |||| || Sbjct 1082543 TCGAAAGATATTCATGACTGGACCACCCGCCTTAACGACAACGAGCGCCATTTCATCTCC 1082484 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || ||||| || || ||||||||||| |||||||| | ||||| | Sbjct 1082483 CATGTCCTCGCTTTCTTCGCAGCCTCGGATGGTATTGTCAACGAGAACCTTGTCGAGCGC 1082424 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 ||||| | || || ||||| | ||||| |||| || || || || ||| | || Sbjct 1082423 TTTTCCAACGAGGTCCAAGTTGCCGAGGCTCGATGTTTCTATGGCTTCCAAATCATGATG 1082364 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || ||||| | ||||||||| |||||||| || || | |||||| | | Sbjct 1082363 GAGAACATTCACTCAGAGACGTATTCGCTTCTCATCGACACCTATATCAAGGACGCTGCC 1082304 Query 57867 GAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGC 57922 || | || || | ||| |||| | || || || || | | |||| ||||| Sbjct 1082303 GA-ACGCGAGTACCTTTTCGACGCCGTGGAGACCATTCC---GTGTGTCAAGCGCAAGGC 1082248 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA-CGTTCGCCGAGAGGCTAATCG 57981 ||| ||| || | || ||||| | | |||| || | || | || | | | | Sbjct 1082247 AGACTGGGCACTGAACTGGATCTCCGAC-CGACGGTCAACTTTTGGTGAACGCTTGGTGG 1082189 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 |||| || || || ||||| || ||||| |||||| || ||| | || || ||||||| Sbjct 1082188 CGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGGATGA 1082129 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || ||| ||||||| |||||||| ||| ||| ||| | || |||||||| | Sbjct 1082128 AGAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGACGAAG 1082069 Query 58102 GTCTCCATACTGATTTTGCGTGCCT 58126 | | || || || ||||| ||||| Sbjct 1082068 GAATGCACACCGACTTTGCATGCCT 1082044 Score = 145 bits (160), Expect = 7e-30 Identities = 367/556 (66%), Gaps = 9/556 (2%) Strand=Plus/Plus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 ||||| || || |||| || || ||||| | |||||| | ||||| || | || | Sbjct 1083724 TACAAGAAAGCTCAAGCCTCATTCTGGACAGCTGAAGAACTTGACCTTTCCCATGACTTC 1083783 Query 57642 AGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCG 57698 || ||| | | | ||||| | |||| | ||||||| || || | || Sbjct 1083784 GTGGACTGGAACTTCAATCTCAACCATGATGAGCGGTATTTTATATCGCATGTTCTTGCT 1083843 Query 57699 TTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAA 57758 || || || || || ||||| ||||| |||||||| | |||||||| |||| ||| Sbjct 1083844 TTCTTTGCGGCCTCAGATGGCATTGTAAACGAGAACCTCGTCGAAAGGTTTTGTGGTGAA 1083903 Query 57759 GTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCAT 57818 ||||| || | |||||| | | ||| || || |||||| | || || || | ||| Sbjct 1083904 GTGCAGGTACCCGAGGCGCGTTCCTTCTATGGCTTTCAAATCATGATGGAGAATATCCAT 1083963 Query 57819 TCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGA 57878 || |||| ||||||| | || |||||| ||| | ||||| | ||| Sbjct 1083964 TCCGAAACGTATTCGTTGCTTATCGATGGCTACATCAAGGATCCGCAGGAGCGGGCCCAC 1084023 Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATC 57935 || ||| |||| || || || || || ||| ||| || || || ||| | | Sbjct 1084024 CTTTTCGACGCCATAGACACCATTCCTTGCATC---AAGCGCAAAGCTGATTGGGCTCTA 1084080 Query 57936 AAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 |||||||| | | | || ||||| || | ||| | || || || || ||| Sbjct 1084081 AAATGGATTTCAGACAAACATTCAACCTTCGCGGAACGTCTAGTTGCCTTTGCTGCTGTC 1084140 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055 ||||| ||||||||||| || ||||| ||||||| ||||| |||||||| || || Sbjct 1084141 GAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAATATTCTGGATCAAGAAACGTGGTCTT 1084200 Query 58056 ATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115 ||||| |||||||| ||| ||| ||| | || || |||||||| | || || ||| Sbjct 1084201 ATGCCTGGCCTGACATTTTCCAATGAGCTTATTAGTCGAGACGAGGGCTTGCACACCGAT 1084260 Query 58116 TTTGCGTGCCTAATGT 58131 || || || ||| ||| Sbjct 1084261 TTCGCATGTCTATTGT 1084276 >seq1000 Length=18647 Score = 165 bits (182), Expect = 7e-36 Identities = 393/582 (68%), Gaps = 19/582 (3%) Strand=Plus/Plus Query 57578 CATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGA 57637 |||||||||| | || |||||||| |||||||| || ||| |||| ||| | || || Sbjct 11853 CATGTACAAACAAGCCGAAGCATCTTTTTGGACGACAGATGAATTAGATCTGGCGAACGA 11912 Query 57638 TCTGAGCGATTGGG---ATTCCCTCAAAGAATCTGAGAGAAA----TTTTATTAAACACG 57690 | ||| ||| || ||| | |||| | |||| ||| || ||||| Sbjct 11913 CGTCGTCGACTGGACAAATCACCTGACT---TCTG-GCGAAAGGTCTTTCCTTTCACACG 11968 Query 57691 TGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTT 57750 ||||||| ||||| || || |||||||| ||||| |||||||| ||| | |||| || Sbjct 11969 TGTTGGCTTTTTTTGCGGCGTCCGATGGAATTGTCAACGAGAACTTGCTGGAAAATTTCG 12028 Query 57751 CACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTT-TACGGATTTCAAGTGGCCATTGAA 57809 | || || || || || || | ||||| || | || || || |||||| Sbjct 12029 CTCAGGAGGTTTCGCCGAGAGAAGCTTGG-GCTTTCTATGCCTTCCAGGTCATGATTGAA 12087 Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAG 57869 || || ||||| |||| || || | | ||||| || ||| | | || | | ||| Sbjct 12088 AATGTTCATTCTGAAACATACTCCTTGTTAATCGACACCTACATCACCGATCCCAAGGAG 12147 Query 57870 AAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTG 57928 || ||| |||||||| |||||||| |||| ||| | ||||||||||| || Sbjct 12148 AAGGCCTTACTTTTCAACGCTATCGAAACTGTGCCTTGCG-TGAAGAAGAAGGCAGAATG 12206 Query 57929 GTCAATCAAATGGA-TAAAAAGCGC-CACGGCCACGTTCGCCGAGAGGCTAATCGCGTTC 57986 | | || | ||||| || | ||| | ||| ||||||| ||| | || | || || Sbjct 12207 GGCGATGACATGGATTACCGACCGCTCGCGG--TCGTTCGCTGAGCGTCTTTTGGCATTT 12264 Query 57987 GCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAA 58046 || || ||||| || |||||||| ||| ||||| || || |||||||| ||||| Sbjct 12265 TCCTGTGTTGAAGGCATTTTCTTTTCCGGCTCATTTGCAGCTATCTTTTGGATCAAGAAG 12324 Query 58047 CGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTC 58106 || || || ||||| || |||| || ||| || ||||| | |||||||| ||| Sbjct 12325 CGAGGGCTCATGCCTGGATTGACTTTCTCCAATGAATTGATCAGTTGTGACGAGGGCCTC 12384 Query 58107 CATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAAT 58148 ||||| || || |||||| | ||| ||| | ||||| ||| Sbjct 12385 CATACCGACTTCGCGTGCTTGCTGTTCTCCTATATTGTGAAT 12426 >seq9840 Length=425 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| || |||||||||||||| || |||||| |||| || ||| | || Sbjct 261 CATGCAGATTTTCGTCAAAACTCTGACAGGCAAGACCATCACCCTCGAAGTCGAATCCTC 320 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | |||| | ||||| || ||| ||||||||||| | ||||| || || Sbjct 321 CGATACTATCGACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGGATTCCGCCTGATCA 380 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||| || || || ||||| ||| | || || Sbjct 381 ACAACGTCTCATTTTTGCCGGCAAGCAGCTTGAGGA 416 >seq434 Length=244965 Score = 96.9 bits (106), Expect = 3e-15 Identities = 252/378 (67%), Gaps = 15/378 (4%) Strand=Plus/Plus Query 22504 TGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCAT 22563 |||| | ||||||||| | |||||| ||||| |||||| || || ||||| ||||| Sbjct 86357 TGTGTAAGGTTCGAAACACTCATTGAAGCCCAGGATCTGACTTGTGGACGCGGTAGGCAT 86416 Query 22564 CGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTC--TTGAGCATC 22621 || || || ||||| ||||| | ||| | || ||||| ||| || | || Sbjct 86417 AGGAGCTGTAAGCAGCGAATTTCTAAGGCCAGTCCGTGCGATTTT-CTCCTTTAATGAT- 86474 Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681 | ||| ||||||| ||| ||| || ||| |||||| ||| | || | | || Sbjct 86475 GCCCAATCCCACAAGCCGGTCGGAGTTACAC---CCCACAAATCAAACTGGAGCTGTCCT 86531 Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAG 22741 | ||||| ||||| | | |||| || ||||||| || | || | || | Sbjct 86532 TGCTGAGCCGGACTGCCAACCCAGGTTTTATATGGACCATCCTTCTCAGCTATCTCAGCG 86591 Query 22742 CTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC---GGCG 22798 ||||| |||| || |||| ||| || ||||||||||||| |||| | || ||| Sbjct 86592 CTCGCTTCCAGTGCACCGTGATAGATCGTCTCGAAGATTTGAATGTTGAGCTCCTTGGCT 86651 Query 22799 GC-GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAAC 22857 || || || || | |||||| ||| || ||| ||||| |||| |||||| || Sbjct 86652 GCTGGTGA----GTCAAATGGCATATGCAGAGCCATGAAGGCGTCGGCCAGACCCTGCAC 86707 Query 22858 GCCTATACCGATCGGTCG 22875 || || ||||| ||||| Sbjct 86708 ACCGATTCCGATGGGTCG 86725 Score = 84.2 bits (92), Expect = 2e-11 Identities = 264/401 (66%), Gaps = 16/401 (4%) Strand=Plus/Plus Query 22108 GTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGT 22167 ||| || || ||||| ||||| | || || || |||| ||||| || ||||||||||| Sbjct 85906 GTCAACGGTGAACTGGATGGCCTGAGCAGCGGGCCTGGTCCGAAGGTAGTACATGCCCGT 85965 Query 22168 CTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAA 22227 ||||| ||| |||||||| ||||||| || || ||||| | ||| | |||| Sbjct 85966 CTTCAAGCCCTTCTTCCACCCGTAAAAGTGCATGCTGGTCAACTGTCCGAGAGTCGGTGC 86025 Query 22228 GTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCAT 22287 | | || | || || ||||||||| || ||||| || |||||||| || | Sbjct 86026 CTGGAGGTGAATGTTCAAGCTCTGACTCTGGCAAATGAACGCGCCGCGATCGGCAGCGAG 86085 Query 22288 ATTTATCAATGTACGCATC-GAC--ATTTCCCATACGGTCTTGTACAGTTGCC-TGATCT 22343 | |||| | | | || ||| || ||||| ||||| ||||| | | ||| ||| | Sbjct 86086 GTCGATCACTTT---CTTCTGACTGATCTCCCAGACGGTTTTGTAGA-TCGCCTTGACGT 86141 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 ||||| | ||| |||||| || ||||||| || |||| || || | Sbjct 86142 TGTCAGGTATGGTGGGGATGTTCTGGATTGATCCGTTATGAGCAATAATCATGTTCTTCA 86201 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGAC-CAGATGAC---GGTTCACC 22459 | | |||| ||| | |||| | || | || || ||| | | || ||| Sbjct 86202 TGTTGTCGTCCCAAAGGCCGA----GATCGACAAGTTCACGGAGAAGCCACGGGCACACG 86257 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTT 22500 ||||| |||||||| | | ||||||||| ||||||||| Sbjct 86258 ACTTGGAACTCGCCAGCAAGGACGCGGCGAGTGTAAATGTT 86298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445706812176480