Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq434 107 4e-18 seq32 96.9 7e-15 >seq434 Length=244965 Score = 107 bits (118), Expect = 4e-18 Identities = 189/270 (70%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAG 94831 ||| | || || |||| ||||||||| || ||| ||| || || | || | ||| | Sbjct 87613 ATGGATGTTGAGACCGATTCCTCCAGCCGTTTTGCTGATCATGGCACAACTTTTCAAG-G 87671 Query 94832 TATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTT 94891 |||| |||||||||||||| ||||||| | || | ||||||||| ||| || | Sbjct 87672 TATCGTAAATACCCTCAATCGAGTCATCTTTCATGCAGACAAGGAAGCAGGAGCTGAGCT 87731 Query 94892 GGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 |||| || ||||| ||| || ||||| || || ||||| || || | || | Sbjct 87732 GGGGATTGGGAGTTCCGGCATTGAAAAGTGTCGGTGATGCATGCGTGAAGTGACGCTCAG 87791 Query 94952 ACATGAGATCATATGTTTCAATGACA-GATTTGATGTCTGATCCGTGAATGCCGACAGCC 95010 |||| || | || || || || ||| ||| | || || || || ||||| || || || Sbjct 87792 ACATCAGGTTGTACGTCTCGATCACACGATCT-ATATCGGAGCCATGAATACCAACGGCA 87850 Query 95011 ACACGCATAATCATGTCCTGAGGGCGCTCA 95040 || ||||||||||||| || || |||||| Sbjct 87851 ACTCGCATAATCATGTGTTGTGGCCGCTCA 87880 >seq32 Length=1481398 Score = 96.9 bits (106), Expect = 7e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || ||||||| | |||||||||||||| || ||||| || |||||| ||| | || Sbjct 1084108 TTCGCGGAACGTCTAGTTGCCTTTGCTGCTGTCGAAGGGATATTCTTTTCTGGGTCGTTT 1084167 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || || || |||||||||||||| | ||| || ||||||| || || | ||||||||| Sbjct 1084168 GCCTCAATATTCTGGATCAAGAAACGTGGTCTTATGCCTGGCCTGACATTTTCCAATGAG 1084227 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATG 102063 | ||| | | ||||| || | || ||| || ||||| Sbjct 1084228 CTTATTAGTCGAGACGAGGGCTTGCACACCGATTTCGCATG 1084268 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || |||||||| |||||||| |||||||| || | ||||| ||||| |||||| Sbjct 1082192 GTGGCGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGG 1082133 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 || ||||| | || | ||||||| || || | ||||||||| ||||| | ||| Sbjct 1082132 ATGAAGAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGAC 1082073 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||||| | || ||||||||||||| | || || Sbjct 1082072 GAAGGAATGCACACCGACTTTGCATGCCTTCTCTT 1082038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989448410292770