Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq32 172 8e-38 seq925 150 3e-31 seq434 105 1e-17 seq247 86.0 9e-12 >seq32 Length=1481398 Score = 172 bits (190), Expect = 8e-38 Identities = 315/459 (69%), Gaps = 7/459 (2%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||||||||||||| ||||| |||||||||| |||||| || || |||||| Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || ||||| || || | ||| ||||| || ||||| |||||| Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 |||||||| || ||||| || || ||||||||||| || | || | | | | Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 |||| ||||| ||| |||||||||| || || || | ||||| || || ||| Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAA 50245 ||||| | || || | | || | ||| || | || |||||| | || Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 || |||| |||| ||||| || || || || || ||||| || ||||| | | | Sbjct 1083977 GA--ATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCG 1083920 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 |||||| | ||||||||| |||||| | ||| | | || || || || || || | Sbjct 1083919 CCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCAT 1083860 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 50404 | ||| ||||| || || | ||||| |||||||| Sbjct 1083859 CTGAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAAT 1083821 >seq925 Length=43645 Score = 150 bits (166), Expect = 3e-31 Identities = 301/438 (69%), Gaps = 15/438 (3%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || ||| |||||||| ||| |||||||| |||| || || || ||||| | |||| Sbjct 13681 CATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGA 13740 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||||| ||||| | || | || || | |||||| || | || ||||| || ||||| Sbjct 13741 TAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAA 13800 Query 50076 GAAGATTCCTTCTAC---TGCGGCAAAGGCAACAAGTCTCTCTCCATAA---CTGGCGCT 50129 ||| || |||||||| |||| |||| |||||| || || || | || | Sbjct 13801 GAAAATCCCTTCTACGCATGCG--AAAGCCAACAA-TCGTTCACCGAACGTTCTTTCCTC 13857 Query 50130 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 |||| |||||| | ||||||||| || || || || || ||||| || ||||| || Sbjct 13858 GTCAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCAT 13917 Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249 ||||| || || | | || |||| || || || | |||| | ||||||||||| Sbjct 13918 CGCATTGAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGA 13977 Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309 ||||| |||||| || | |||||| || | |||||| |||||||| | | || || Sbjct 13978 ATACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTC 14037 Query 50310 GGTAATCTGC--ACTTC-TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 || || ||||| || |||| | ||| | || || || ||||| ||||| || Sbjct 14038 --CAAAGGGCCGACTTCTTGCGCAAAGT-TTTCCACCAAGTTCTCGTTCACGATTCCATC 14094 Query 50367 ACTGGCTGCAAAAAACGC 50384 ||||||||||| || Sbjct 14095 GGATGCTGCAAAAAAAGC 14112 >seq434 Length=244965 Score = 105 bits (116), Expect = 1e-17 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 79951 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 || || ||||| ||||| || || || ||| |||||||| | ||| || || || || Sbjct 87307 AAAAGGTCAGGGATCCACAGCGCGTAGAAA-AGATCTCTTGCCCTAGATTCTTCCTTGCC 87365 Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069 |||||| | ||||||||| | | | ||||| |||||| ||||| | ||| || Sbjct 87366 ATGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGAT 87425 Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129 || | |||| ||||| ||||||||||| ||||| | ||| | ||| ||| || ||| Sbjct 87426 CGCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCAGTGGCATCATA 87485 Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174 | | | | |||||| | || ||||| || |||||||||||| Sbjct 87486 AGCACGAAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCC 87530 >seq247 Length=45445 Score = 86.0 bits (94), Expect = 9e-12 Identities = 357/549 (65%), Gaps = 27/549 (5%) Strand=Plus/Plus Query 49975 TGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 50034 || || || |||||||| || ||||||||||| ||||| || | || |||| || ||| Sbjct 37348 TGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAAAAAGTTAAGCCTGGCA-TAAGCCC 37406 Query 50035 CGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCG 50094 || || |||| |||||| | | ||||| || || || ||||| || ||||| || Sbjct 37407 CGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCGGAGAAGAAAATGCCTTCCACACAC 37466 Query 50095 GCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTG--TCATGTATCCACTTTTGAGC 50150 ||||||||||| | | || | || |||| || |||| ||||| || || Sbjct 37467 GCAAAGGCAACCAAACGTTCGGGA-AAGAGGCGGATTGGATCATTAATCCATTTCAATGC 37525 Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210 ||| | || || | | | ||| || || || || || || || |||||| | Sbjct 37526 CCAGTTCGCTTTTTCCTGGATACAGGGAATAGTCTCGATAGCGTTGAAGAGACGGGCCCG 37585 Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCAA--AAGACTATACATTTCCGAATGAATG 50268 ||| | || || || ||| ||||| ||||| || ||| | || || |||| Sbjct 37586 TTCCGTGCTGTCACGAATATAGGTATCTATCAAGGTCGAATATGC--CTCGGAGTGAACA 37643 Query 50269 TTTTCAATGGCCAT---CTGAAATCCGTAGAAACATCTAGCCTC---GGTAATCTGCACT 50322 ||||| || ||| || || ||||| || | ||||| || | | | | Sbjct 37644 TTTTCGAT---CATTGATTGGAAACCGTAAAAGGCACGGGCCTCCCAGGGA--CCG-ATC 37697 Query 50323 TCTGTACAAAATCGTT-CAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 ||| | | || |||| |||| |||||||| || || || ||||| |||||| || || Sbjct 37698 TCTTGAGAGAACCGTTCCAGC-AAATTTTCGTTAACGATGCCGTCCGAGGCTGCGAAGAA 37756 Query 50382 CGCCAATACATGTTTTATAAAATGT---TTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438 |||| |||||| | ||||||| | ||||| | | || | ||| || Sbjct 37757 GGCCAGCACATGTGACAAAAAATGTCTGTCATCGTTCGACAGACGGTTCTCCCAGTCGCC 37816 Query 50439 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498 | |||| | | ||| | || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 37817 CAAATCTGAACGAAGATCAAGCTCCTCCACGGTCCAGAATGACGCCTCCGCCTTCTTATA 37876 Query 50499 CATATTCCA 50507 ||| | ||| Sbjct 37877 CATCTGCCA 37885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718172785418160