Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq32 161 9e-35 seq925 156 4e-33 seq179 122 8e-23 seq1000 111 2e-19 >seq32 Length=1481398 Score = 161 bits (178), Expect = 9e-35 Identities = 380/567 (67%), Gaps = 15/567 (3%) Strand=Plus/Minus Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715 || ||| || ||||| || | |||||| |||| ||||||||| || || |||||||| Sbjct 1084272 TAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAAAATGT 1084213 Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775 | || ||||| | || ||||| || | ||| ||||||| || || || || ||||| Sbjct 1084212 CAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCAGAAAA 1084153 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835 |||||| || || || |||||||| || | ||| ||||| | || | || | ||||| Sbjct 1084152 GAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGTTTGTC 1084093 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 ||| ||||||||| |||||| |||| ||| || || || || || || || || Sbjct 1084092 TGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCTATGGC 1084033 Query 13896 ATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 | ||| | || || ||| | | | |||| ||||| ||| ||||| || | Sbjct 1084032 GTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTG--ATGTAGCCATCGATAAGCAACGAA 1083975 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 ||| |||| || || || || || || || ||||| ||||| || | | || || Sbjct 1083974 TACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCCTCG 1083915 Query 14014 G--ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 | ||| || || || |||| ||||| | | ||| || || ||||| ||||| Sbjct 1083914 GGTACC--TGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCTG 1083857 Query 14072 TAGCTGCAAAAAATGC--CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT 14129 || ||||| || || || ||| | ||||| || |||| |||| |||||| || Sbjct 1083856 AGGCCGCAAAGAAAGCAAGAACATGCGAT--ATAAAATACCGCTCATCATGGTTGAGATT 1083799 Query 14130 ---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14186 ||||| || | || || | ||||| || | ||| ||| ||||||| || || Sbjct 1083798 GAAGTTCCAGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGGC 1083739 Query 14187 GACAGCTTTTTTATACATTACCCATAT 14213 |||||| || || | | |||||| Sbjct 1083738 TTGAGCTTTCTTGTAGAATTGCCATAT 1083712 Score = 82.4 bits (90), Expect = 7e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 13693 CTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAAT 13752 ||||| || || || ||||| || | || |||||||| ||||| || || | ||| || Sbjct 1082080 CTAATGAGCTCATTGGAAAAAGTCAGGCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAG 1082139 Query 13753 ATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGT 13812 || | ||||| || || || ||||| || || ||||| ||||||||||| | | ||| Sbjct 1082140 ATGGACGCGAAAGAGCCCGAGAAGAAGATGCCTTCAACAGCAGCAAACGCCACCAAGCGT 1082199 Query 13813 TCTCCAAA 13820 || ||||| Sbjct 1082200 TCACCAAA 1082207 >seq925 Length=43645 Score = 156 bits (172), Expect = 4e-33 Identities = 301/435 (69%), Gaps = 12/435 (3%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 |||||| ||||| ||||| |||||||||| || ||||| ||||||| || | || Sbjct 13684 ACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGATAG 13743 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 |||||||||||| || | ||| || |||||||| || || |||||||| ||||||||||| Sbjct 13744 TCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAAGAA 13803 Query 13779 TATTCCCTCAACTGCA-GCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTG 13837 || || || || ||| || || || | | |||||| || |||| | || | || | Sbjct 13804 AATCCCTTCTAC-GCATGCGAAAGCCAACAATCGTTCACCGAACGTTCTTTCCTCGTCAG 13862 Query 13838 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCAT 13897 |||||| | |||||| || | |||||| || | || |||||||| || |||| Sbjct 13863 TTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCATCGCAT 13922 Query 13898 TGAATAAAT--GTTCCTTCTCTTTAGTACTTGAAATGTATGT--ATCAATAAGTAAGCTA 13953 |||||| | ||| ||| | | || ||||| || ||| ||||| ||| | | Sbjct 13923 TGAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAA-AAGCGA---A 13978 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 |||| ||| ||||| | |||||| || | |||||| || || || | | ||||| Sbjct 13979 TACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTCC 14038 Query 14014 GACCATTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072 | || || | | ||| | |||| ||||||| || || || || ||||| Sbjct 14039 AAAGGGCCGACTTCTTGCGCAAAGT-TTTCCACCAAGTTCTCGTTCACGATTCCATCGGA 14097 Query 14073 AGCTGCAAAAAATGC 14087 ||||||||||| || Sbjct 14098 TGCTGCAAAAAAAGC 14112 >seq179 Length=47363 Score = 122 bits (134), Expect = 8e-23 Identities = 235/342 (69%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 13674 ATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCC 13733 ||| || || |||||||| || ||||| || || || || || ||||||||||||| || Sbjct 9347 ATGTAGACCTTCATCTCTGCTGATAAGCTCATTGGAGAAAGTCAATCCTGGCATCACACC 9288 Query 13734 TCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGC 13793 ||||| || | |||||| || || ||||| || || ||||| || || || || || || Sbjct 9287 ACGTTTCTTCAGCCAAAAAATGGCCGCGAAGGAACCAGAAAAAAAGATGCCTTCCAC-GC 9229 Query 13794 A-GCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAG 13852 | ||||| |||| || | |||||| | | | | |||||||| | Sbjct 9228 AGGCAAAGGCTACGAGGTGGCTTCCAAAGGCAACCGCGGAATCTTCGATCCATTTCAATG 9169 Query 13853 CCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGT--TC 13910 |||| || | ||| |||| || | ||||||||||| | |||| ||| | |||| || Sbjct 9168 CCCAATCCGCCTTTCTTTTGATGCACTCCATTGTTTCAAGCGCATCGAAGAGATGTAATC 9109 Query 13911 CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 13970 ||||| || || || || || || || ||||| |||| |||| || || | Sbjct 9108 GTTCTC--GGGTGTCTGCAACATAGGTGTCGATGAGTAAAGAATACGTTTCGGAATGGAC 9051 Query 13971 GTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 |||||| || ||||||||||| ||||| | | |||||| Sbjct 9050 GTTTTCGATCATAATCTGAAAACCGTAAAACGAGCGAGCTTC 9009 >seq1000 Length=18647 Score = 111 bits (122), Expect = 2e-19 Identities = 366/561 (65%), Gaps = 11/561 (2%) Strand=Plus/Minus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 || ||||| || || ||| |||||||| || | ||| || | ||| || || || || Sbjct 12404 AAGCACGCGAAGTCGGTATGGAGGCCCTCGTCACAACTGATCAATTCATTGGAGAAAGTC 12345 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 ||||| ||||| | ||||| || || | |||||| || || || ||||| ||||||||| Sbjct 12344 AATCCAGGCATGAGCCCTCGCTTCTTGATCCAAAAGATAGCTGCAAATGAGCCGGAAAAG 12285 Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTT 13836 || || || ||||| | ||| || | || || || | ||||| || Sbjct 12284 AAAATGCCTTCAACACAGGAAAATGCCAAAAGACGCTCAGCGAACGACCGCGAGCGGTCG 12225 Query 13837 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCA 13896 | |||||| | | |||||||| | || || || | || || |||||||| || Sbjct 12224 GTAATCCATGTCATCGCCCATTCTGCCTTCTTCTTCACGCAAGGCACAGTTTCGATAGCG 12165 Query 13897 TTGAATA--AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 13954 ||||| | || | ||||||| || | | | ||||| || || || | ||| | Sbjct 12164 TTGAAAAGTAAGG--CCTTCTCCTTGGGATCGGTGATGTAGGTGTCGATTAACAAGGAGT 12107 Query 13955 ACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14014 | ||||||| || | ||||| || | ||| || |||| ||| | ||||||| Sbjct 12106 ATGTTTCAGAATGAACATTTTCAATCATGACCTGGAAGGCATAGAAAGCCCAAGCTTCTC 12047 Query 14015 ACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 | |||||| ||| |||| |||| |||||| || || ||||| ||||| Sbjct 12046 TCGGCGAAACCTCCTGAGCGAAAT-TTTCCAGCAAGTTCTCGTTGACAATTCCATCGGAC 11988 Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAA-TAAAG---TATTGCTCTTCATTGTTGAGTTT 14129 || |||||||| ||||| | || | || |||| | | || | | | | | || Sbjct 11987 GCCGCAAAAAAAGCCAACACGTGTGAAAGGAAAGACCTTTCGC-CAGAAGTCAGGTGATT 11929 Query 14130 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 | |||| ||| | | || || | ||||||| |||||| ||||||||| || | Sbjct 11928 TGTCCAGTCGACGACGTCGTTCGCCAGATCTAATTCATCTGTCGTCCAAAAAGATGCTTC 11869 Query 14190 AGCTTTTTTATACATTACCCA 14210 |||| ||| ||||| |||| Sbjct 11868 GGCTTGTTTGTACATGGCCCA 11848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478524824642160