Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq32 159 5e-34 seq925 141 1e-28 seq434 102 1e-16 >seq32 Length=1481398 Score = 159 bits (176), Expect = 5e-34 Identities = 313/460 (68%), Gaps = 7/460 (2%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| | ||||||||||||| ||||| ||||| |||| |||||| | || |||||| Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || ||||| || ||||| || || | ||| ||||| || ||||| || ||| Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA--- 42232 |||||||| || ||||| || || |||||||||| || | || | | | | Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 |||| ||||| ||| |||||||||| || || || | ||||| || || ||| Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAA 42350 ||||| | || || | | || | ||| || | || |||||| | || Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 || |||| |||| ||||| || || || || || ||||| || ||||| | | | Sbjct 1083977 GA--ATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCG 1083920 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 |||||| ||||| ||||| |||||| | ||| | | || ||||| || || || | Sbjct 1083919 CCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCAT 1083860 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 42510 | ||| ||||| || || | ||||| ||||||||| Sbjct 1083859 CTGAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATA 1083820 >seq925 Length=43645 Score = 141 bits (156), Expect = 1e-28 Identities = 370/555 (67%), Gaps = 12/555 (2%) Strand=Plus/Plus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 || ||| |||||||| ||| ||||||||||||| || || | ||||| | |||| Sbjct 13681 CATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGA 13740 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||||| ||||| | || | || || | |||||| || | || ||||| || ||||| Sbjct 13741 TAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAA 13800 Query 42181 GAAGATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATAACCGGCACT----G 42235 ||| || |||||||| || |||| ||| || || || || ||| | | | Sbjct 13801 GAAAATCCCTTCTACGCATGCGAAAGCCAACAA-TCGTTCACCG-AACGTTCTTTCCTCG 13858 Query 42236 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 ||| |||||| | ||||||||| || || || || || ||||| || ||||| || Sbjct 13859 TCAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCATC 13918 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 ||||| || || | | || |||| || || || | ||| | ||||||||||| | Sbjct 13919 GCATTGAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGAA 13978 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 |||| ||| || || | |||||| || | |||||| |||||||| | | ||| || Sbjct 13979 TACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTCC 14038 Query 42416 GTAACCTGTACTTC-TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474 | ||||| || |||| | ||| | || || |||||||| ||||| || Sbjct 14039 AAAGGGCCGACTTCTTGCGCAAAGT-TTTCCACCAAGTTCTCGTTCACGATTCCATCGGA 14097 Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATT--TA 42532 ||||||||||| || | | | | | ||| || | |||||| | ||||| | Sbjct 14098 TGCTGCAAAAAAAGCAAGAATACGAGAAACAAAGAATCTGTCGTCCACGGATAATTCGTC 14157 Query 42533 TTCCAATCAT-TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591 ||| || | | | || | | || | |||||| | |||||||| ||||||| Sbjct 14158 CTCCCATTGTGTTACGTCCCGACGAAGGTCGATTTCTTCCGCGGTCCAAAAGGATGCTTG 14217 Query 42592 TGCCTTTTTATACAT 42606 |||||||| ||||| Sbjct 14218 AGCCTTTTTGTACAT 14232 >seq434 Length=244965 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 72034 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 || || ||||| ||||| || || || ||| |||||||| | ||| || || || || Sbjct 87307 AAAAGGTCAGGGATCCACAGCGCGTAGAAA-AGATCTCTTGCCCTAGATTCTTCCTTGCC 87365 Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152 |||||| | ||||||||| | | | ||||| |||||| ||||| | ||| || Sbjct 87366 ATGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGAT 87425 Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212 || | |||| || || ||||||||||| ||||| | ||| | ||| ||| || ||| Sbjct 87426 CGCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCAGTGGCATCATA 87485 Query 72213 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 72257 | | | | |||||| | || ||||| || |||||||||||| Sbjct 87486 AGCACGAAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCC 87530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671049485467440