Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq9840 154 3e-32 seq925 147 5e-30 seq179 140 7e-28 seq247 129 1e-24 seq1000 125 2e-23 seq32 113 1e-19 seq2021 96.9 8e-15 >seq9840 Length=425 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| || || || ||||| ||||||| |||||| Sbjct 246 AAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCGTC 187 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || || |||||||| | ||| ||||| ||||| || || || ||||| Sbjct 186 CTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATC 127 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||| || ||||| || | ||| ||| || || || || || || || || Sbjct 126 CTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGT 67 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | ||| || ||||| |||||||| Sbjct 66 CTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Score = 89.7 bits (98), Expect = 1e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 ||| || || || || || || |||||||| || | ||||||||||| || || ||||| Sbjct 420 ACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTC 361 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 || || || || || || || || || || | |||||| | ||| || || || || Sbjct 360 CTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGT 301 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || ||||| || || |||||||| Sbjct 300 GATGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCAT 262 >seq925 Length=43645 Score = 147 bits (162), Expect = 5e-30 Identities = 378/565 (67%), Gaps = 22/565 (4%) Strand=Plus/Minus Query 268741 GATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGA 268800 |||||||||| |||| || || |||||||| | |||||| | || || | || Sbjct 14233 GATGTACAAAAAGGCTCAAGCATCCTTTTGGACCGCGGAAGAAATCGACCTTCGTCGGGA 14174 Query 268801 CTTAATAGATTGGAAA----AATTTAAAACCA--GAAGAAAGAAGATTTATATCTTATAT 268854 | ||| | | ||| | |||| | || || || ||| ||| | ||| ||| Sbjct 14173 CGTAACACAATGGGAGGACGAATT---ATCCGTGGACGACAGATTCTTTGTTTCTCGTAT 14117 Query 268855 TCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTG 268914 |||||| |||||||||| ||||| ||||| ||||| || | || || || || Sbjct 14116 TCTTGCTTTTTTTGCAGCATCCGATGGAATCGTGAACGAGAACTTGGTGGAAAACTTTGC 14057 Query 268915 TCAAGAGGTACAGATTCCT---GAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGA 268971 ||||| || | | ||| |||||| | | || ||||| || ||| | || || Sbjct 14056 GCAAGAAGT-CGGC--CCTTTGGAAGCCCGTTACTTCTACGGCTTTCAGTTCATGATCGA 14000 Query 268972 AAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGA 269031 ||| | || || || |||| || || || || | |||||| | || ||||||| Sbjct 13999 AAACGTCCACTCGGAAGTGTATTCGCTTTTGATCGACAGTTATATCAAGGACGACAACGA 13940 Query 269032 AAAGAAAAGA-CTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAAT 269090 || ||| || ||||| | | ||| ||| || || |||| |||||| | || | Sbjct 13939 AA-GAAGCGAACTATTCAATGCGATGGAAACAATTCCTTGCGTGAAGAAAAAAGCAGATT 13881 Query 269091 GGGCTCTGAAATGGATAA---ACGAT-AGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTT 269146 ||||| ||| ||||||| |||| | | | || ||| ||| | || | ||||| Sbjct 13880 GGGCTTTGACTTGGATAACTGACGAGGAAAGAACGTT-CGGTGAACGATTGTTGGCTTTC 13822 Query 269147 GCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAA 269206 || |||||||| || |||||||| || || || ||||| |||||||||||||||||| Sbjct 13821 GCATGCGTAGAAGGGATTTTCTTTTCCGGCTCATTCGCCGCGATCTTTTGGTTGAAGAAA 13762 Query 269207 AGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTA 269266 || || | ||||||||| || | ||| | ||||| | || ||| | || || ||| | Sbjct 13761 AGGGGTTTGATGCCAGGACTATCGTTCGCAAACGAGCTTATCAGCCGAGATGAGGGTCTT 13702 Query 269267 CACTGCGACTTCGCTTGTTTATTAT 269291 ||| || ||||| ||| | |||| Sbjct 13701 CACACAGATTTCGCGTGTATGTTAT 13677 >seq179 Length=47363 Score = 140 bits (154), Expect = 7e-28 Identities = 380/574 (66%), Gaps = 22/574 (4%) Strand=Plus/Plus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 || |||| ||||||||| || |||| || ||||||||||| || || ||| | ||| || Sbjct 8805 ATGTGGATGATGTACAAGCAAGCCGAAGCGTCTTTTTGGACGGTCGATGAACTCGATTTG 8864 Query 268793 TCTTATGA-CTTAATAGATTGGAAAAATT---TAAAACCAGAAGAAAGAAGATTTATATC 268848 | || |||||| |||||| | | | | | || | ||| | || || | Sbjct 8865 CGGTCCGATCTTAAT-GATTGGGAGACTCGCCTTTCAGCAAACGAACGGTTTTTCATCAC 8923 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 || | ||||| |||||||| | ||| || ||||| |||||||| || ||| | || Sbjct 8924 CCATGTCCTTGCATTTTTTGCTGCGTCTGACGGCATCGTGAACGAAAACCTTGTACAAAA 8983 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 |||||| || | | | ||||| | | |||||||| || ||||| || Sbjct 8984 CTTCTGTTGCGAAATTGGGCCTTTGGAAGCTCGCTCGTTTTACGGTTTTCAGATTATGAT 9043 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAA 269028 ||||| | ||||| || | ||| | || | || || || ||| | | || | | Sbjct 9044 CGAAAACGTCCATTCCGAAACGTATTCTTTACTCATCGACACCTATGTTGCAGACACC-- 9101 Query 269029 CGAAAAGAAAAGACTATTT-TCTTCTATGAG-----AACTATGGACTGTGTGAGaaaaaa 269082 ||| || || || | ||||| ||| | ||| ||||| || | | || ||| Sbjct 9102 CGAGAAC----GATTACATCTCTTCGATGCGCTTGAAACAATGGAGTGCATCAAAAGAAA 9157 Query 269083 aTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCG----CCTTACGGAGAAAGGTTAG 269138 | || ||||| |||||||||| | ||| |||| |||| | || | | | Sbjct 9158 GGCGGATTGGGCATTGAAATGGATCGAAGATTCCGCGGTTGCCTTTGGAAGCCACCTC-G 9216 Query 269139 TTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGT 269198 | || |||||| || ||||| || || ||||| || || || || || || |||||| Sbjct 9217 TAGCCTTTGCCTGCGTGGAAGGCATCTTTTTTTCTGGTTCCTTCGCGGCCATTTTTTGGC 9276 Query 269199 TGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACG 269258 |||||||| | || | ||||||||||| |||||||| || || | || ||||| || | Sbjct 9277 TGAAGAAACGTGGTGTGATGCCAGGATTGACTTTCTCCAATGAGCTTATCAGCAGAGATG 9336 Query 269259 AAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292 ||||| |||| ||||||||| ||| | || || Sbjct 9337 AAGGTCTACATACCGACTTCGCATGTCTTTTGTT 9370 >seq247 Length=45445 Score = 129 bits (142), Expect = 1e-24 Identities = 289/424 (68%), Gaps = 14/424 (3%) Strand=Plus/Minus Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTG-- 268934 || || ||||||||||||||| | | || ||||| ||||||| | | | |||| Sbjct 37741 GACGGCATCGTTAACGAAAATTTGCTGGAACGGTTCTCTCAAGAGATC--GGTCCCTGGG 37684 Query 268935 AAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACA 268994 | ||| | |||||||| ||||| | || |||||| |||| || ||| | | | Sbjct 37683 AGGCCCGTGCCTTTTACGGTTTCCAATCAATGATCGAAAATGTTCACTCCGAG--GCATA 37626 Query 268995 GTCTA--TTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTC 269052 || | || |||||||| ||||| ||| | || ||| | | || || | Sbjct 37625 TTCGACCTTGATAGATACCTATATTCGTGACAGCACGGAACGGGCCCGTCTCTTCAACGC 37566 Query 269053 TAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACG 269111 ||| |||| |||| |||| | ||||| | | ||||| |||||||||| || | Sbjct 37565 TATCGAGA-CTATTCCCTGTATCCAGGAAAAAGCGAACTGGGCATTGAAATGGATTAATG 37507 Query 269112 AT--AGCGCGCCT-TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCT 269168 || | ||||| | ||| | || ||||| ||||| ||| ||||| || |||| Sbjct 37506 ATCCAATCCGCCTCTTTCCCGAACGTTTGGTTGCCTTTGCGTGTGTGGAAGGCATTTTCT 37447 Query 269169 TTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAA 269228 | || || || ||||| || |||||||| | |||||| | ||| |||||||||| |||| Sbjct 37446 TCTCCGGATCGTTTGCAGCAGTCTTTTGGATTAAGAAACGGGGC-TTATGCCAGGCTTAA 37388 Query 269229 CTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTAT 269288 |||| || |||||| | || ||||| |||||||| | || ||||| || ||| ||| Sbjct 37387 CTTTTTCGAACGAACTAATCAGCAGAGACGAAGGACTTCATACGGACTTTGCCTGTCTAT 37328 Query 269289 TATT 269292 | || Sbjct 37327 TGTT 37324 >seq1000 Length=18647 Score = 125 bits (138), Expect = 2e-23 Identities = 359/551 (65%), Gaps = 6/551 (1%) Strand=Plus/Plus Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801 ||||||||||| |||| || ||||||||||| ||| ||| |||||||| | | ||| Sbjct 11854 ATGTACAAACAAGCCGAAGCATCTTTTTGGACGACAGATGAATTAGATCTGGCGAACGAC 11913 Query 268802 TTAATAGATTGGAAAAATT---TAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTT 268858 | | || |||| |||| | | | | ||||| || | || | | | Sbjct 11914 GTCGTCGACTGGACAAATCACCTGACTTCTGGCGAAAGGTCTTTCCTTTCACACGTGTTG 11973 Query 268859 GCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAA 268918 || |||||||| | ||||| || || ||||| || | | || || ||| ||| Sbjct 11974 GCTTTTTTTGCGGCGTCCGATGGAATTGTCAACGAGAACTTGCTGGAAAATTTCGCTCAG 12033 Query 268919 GAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATT 268978 ||||| | ||||| | ||| || | |||||| | || |||||| || Sbjct 12034 GAGGTTTCGCCGAGAGAAGCTTGGGCTTTCTATGCCTTCCAGGTCATGATTGAAAATGTT 12093 Query 268979 CATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAA 269038 ||||| || | ||| | ||||| || || || || ||| ||| || ||| Sbjct 12094 CATTCTGAAACATACTCCTTGTTAATCGACACCTACATCACCGATCCCAAGGAGAAGGCC 12153 Query 269039 AGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTG 269098 ||| || |||| |||| || || |||| || || | |||||||| || Sbjct 12154 TTACTTTTCAACGCTATCGAAACTGTGCCTTGCGTGAAGAAGAAGGCAGAATGGGCGATG 12213 Query 269099 AAATGGATAAACGATAGCGCGC---CTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTA 269155 | |||||| | ||| || ||| | | || || | | | || ||| || ||| Sbjct 12214 ACATGGATTACCGACCGCTCGCGGTCGTTCGCTGAGCGTCTTTTGGCATTTTCCTGTGTT 12273 Query 269156 GAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTT 269215 ||||| || |||||||| || || ||||| |||||||||||| | ||||| |||| || Sbjct 12274 GAAGGCATTTTCTTTTCCGGCTCATTTGCAGCTATCTTTTGGATCAAGAAGCGAGGGCTC 12333 Query 269216 ATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGAC 269275 ||||| ||||| |||||||| || |||||||| || | ||||| || | || |||| Sbjct 12334 ATGCCTGGATTGACTTTCTCCAATGAATTGATCAGTTGTGACGAGGGCCTCCATACCGAC 12393 Query 269276 TTCGCTTGTTT 269286 ||||| || || Sbjct 12394 TTCGCGTGCTT 12404 >seq32 Length=1481398 Score = 113 bits (124), Expect = 1e-19 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 269081 aaaTCTGAATGGGCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTTA 269137 ||| |||| |||||||| |||||||| | || | | | | || ||| | || Sbjct 1084063 AAAGCTGATTGGGCTCTAAAATGGATTTCAGACAAACATTCAACCTTCGCGGAACGTCTA 1084122 Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| ||||| ||||| ||||| ||||||||||| ||||| |||||| | || || ||| Sbjct 1084123 GTTGCCTTTGCTGCTGTCGAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAATATTCTGG 1084182 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | |||||| | || |||||||| || | || || || || || | || || | ||| Sbjct 1084183 ATCAAGAAACGTGGTCTTATGCCTGGCCTGACATTTTCCAATGAGCTTATTAGTCGAGAC 1084242 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295 || || || ||| ||| ||||| ||| |||| || || Sbjct 1084243 GAGGGCTTGCACACCGATTTCGCATGTCTATTGTTCAC 1084280 >seq2021 Length=7336 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||||||||| || || || | ||| | ||||| || | || || || ||||| Sbjct 248 TCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAACTGCTTCCCGGCAAAG 189 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || |||||||| || || || |||||||||||||| || || ||||| Sbjct 188 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTG 129 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| || || || || | || || ||||| || || | || || || Sbjct 128 TCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGTCAAAGTCTTCACG 69 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 68 AAGATTTGCAT 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151240638989352