Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq9840 98.7 8e-16
seq2021 84.2 2e-11
>seq9840
Length=425
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || ||||||||||||| | ||| ||||||| || ||||| ||| || |
Sbjct 225 CTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAA 166
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
||||| ||||||||||| || | | ||||| ||| ||| || ||||| |
Sbjct 165 AATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATT 106
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||||||| || | || || || || ||||| | || |||||
Sbjct 105 GTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCAC 46
Query 48715 AAAAATCTGCAT 48726
||||||||||||
Sbjct 45 AAAAATCTGCAT 34
>seq2021
Length=7336
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 48521 AAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGC 48580
|| ||||| ||||||||||| ||||| |||||||| | ||| ||| ||||||||| |
Sbjct 263 AAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAAC 204
Query 48581 TGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATT 48640
||||| ||| | | || | |||||||| || || | | ||||| ||| |||
Sbjct 203 TGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATC 144
Query 48641 TTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||| ||| | | | || ||||| | |||||| || | || || || || ||
Sbjct 143 TTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCC 84
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| ||||| || || |||||
Sbjct 83 GTCAAAGTCTTCACGAAGATTTGCAT 58
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421196297014694
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |