Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq9840 84.2 2e-11 >seq9840 Length=425 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 || || ||||| || | ||| ||||| | || ||| || ||||| || || || | Sbjct 230 GTTGACTCCTTCTGGATGTTGTAATCAG--AAAGAGTTCGACCGTCCTCGAGTTGCTTGC 173 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | || |||| | |||||||| |||||||| || || || || | ||| ||||||| Sbjct 172 CGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTTGCCT 113 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | ||| ||||| | || || || | |||||| || || || || | | Sbjct 112 TGACATTGTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGTCTTGCCGGTCAATG 53 Query 94989 TTTTCACAAAGATCTGCAT 95007 | |||||||| |||||||| Sbjct 52 TCTTCACAAAAATCTGCAT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448231274673840