Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq925 156 5e-33
seq32 156 5e-33
seq434 102 1e-16
seq247 82.4 1e-10
>seq925
Length=43645
Score = 156 bits (172), Expect = 5e-33
Identities = 302/436 (69%), Gaps = 11/436 (3%)
Strand=Plus/Plus
Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359
|| ||| |||||||| ||| |||||||| |||| || || || ||||| | ||||
Sbjct 13681 CATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGA 13740
Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419
||||| ||||| | || | || || | |||||| || | |||||||| || |||||
Sbjct 13741 TAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAA 13800
Query 33420 GAAGATTCCTTCTACTGCA-GC-AAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---- 33473
||| || |||||||| ||| || |||| ||| || || || || ||| | |
Sbjct 13801 GAAAATCCCTTCTAC-GCATGCGAAAGCCAACAA-TCGTTCACCG-AACGTTCTTTCCTC 13857
Query 33474 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533
|||| |||||| | ||||||||| || || || || || ||||| || ||||| ||
Sbjct 13858 GTCAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCAT 13917
Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593
||||| || || | | || |||| || || || | |||| | |||||||||||
Sbjct 13918 CGCATTGAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGA 13977
Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653
||||| |||||| || | |||||| || | |||||| |||||||| | | || ||
Sbjct 13978 ATACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTC 14037
Query 33654 GGTAATCTGTACTTC-TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCAC 33712
| ||||| || |||| | |||| |||| || || ||||| ||||| ||
Sbjct 14038 CAAAGGGCCGACTTCTTGCGCAAAGT-TTTCCACCAAGTTCTCGTTCACGATTCCATCGG 14096
Query 33713 TGGCTGCAAAAAACGC 33728
||||||||||| ||
Sbjct 14097 ATGCTGCAAAAAAAGC 14112
>seq32
Length=1481398
Score = 156 bits (172), Expect = 5e-33
Identities = 312/460 (68%), Gaps = 7/460 (2%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| | ||||||||||||| ||||| |||||||||| |||||| || || ||||||
Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || || || ||||| || ||||| || || | ||| ||||| || || || || |||
Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 33471
|||||||| || ||||| || ||||||||||||| || | || | | |
Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098
Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33531
|||| ||||| ||| |||||||||| || || || | ||||| || || |||
Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038
Query 33532 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAA 33589
||||| | || || | | || | ||| || | || |||||| | ||
Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978
Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649
|| |||| |||| ||||| || || || || || ||||| || ||||| | | |
Sbjct 1083977 GA--ATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCG 1083920
Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGT 33709
|||||| | ||| ||||| |||||| | ||| | | || || || || || || |
Sbjct 1083919 CCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCAT 1083860
Query 33710 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 33749
| ||| ||||| || || | ||||| |||||||||
Sbjct 1083859 CTGAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATA 1083820
>seq434
Length=244965
Score = 102 bits (112), Expect = 1e-16
Identities = 159/225 (71%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 63228 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286
|| || ||||| ||||| || || || ||| |||||||| | ||| ||| || || ||
Sbjct 87307 AAAAGGTCAGGGATCCACAGCGCGTAGAAA-AGATCTCTTGCCCTAGATTCTTCCTTGCC 87365
Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346
|||||| | ||||||||| | | | ||||| |||||| ||||| | ||| ||
Sbjct 87366 ATGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGAT 87425
Query 63347 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63406
|| | |||| || || ||||||||||| ||||| | ||| | ||| ||| || |||
Sbjct 87426 CGCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCAGTGGCATCATA 87485
Query 63407 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63451
| | | | |||||| | || || ||||| ||||||||| ||
Sbjct 87486 AGCACGAAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCC 87530
>seq247
Length=45445
Score = 82.4 bits (90), Expect = 1e-10
Identities = 97/130 (75%), Gaps = 1/130 (1%)
Strand=Plus/Plus
Query 33319 TGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 33378
|| || || |||||||| || ||||||||||| ||||| || | || |||| || |||
Sbjct 37348 TGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAAAAAGTTAAGCCTGGCA-TAAGCCC 37406
Query 33379 CGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCA 33438
|| || |||| |||||| | | || || ||||| || ||||| || ||||| ||
Sbjct 37407 CGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCGGAGAAGAAAATGCCTTCCACACAC 37466
Query 33439 GCAAAGGCAA 33448
||||||||||
Sbjct 37467 GCAAAGGCAA 37476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622863927533040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |