Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9840 104 2e-17 seq247 87.8 2e-12 seq32 84.2 2e-11 >seq9840 Length=425 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||||| || || || |||| || | ||||| ||| | | Sbjct 34 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACGCTGGAAGTGGAGTCTTCC 93 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||||| || || || ||||| ||||||||||| Sbjct 94 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCCGATCAG 153 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 ||| | || |||| || ||||||||||||||| || Sbjct 154 CAGCGCCTAATTTTCGCCGGCAAGCAACTCGAGGA 188 >seq247 Length=45445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/151 (75%), Gaps = 10/151 (7%) Strand=Plus/Plus Query 104589 TTTGTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATT 104648 ||||||||| || |||||||| |||||||| || ||||| |||||||| ||||| ||| Sbjct 36998 TTTGTATTCCCCGACTCGTTTCTCAAAAAAGTTTGTCTTACCCTCCAGCGAAATCATATC 37057 Query 104649 CATAAATTCGAAAGGATTC--AAAGTCTTAAAATATTT--TTCGTAGCCAAGCTCGATCA 104704 ||| || || || || ||| || || |||| | ||| ||| || ||| | ||| Sbjct 37058 CATGAAATCAAAGGGGTTCGCAACGTGGTAAA-TCTTTGATTCT---CCCAGCGCT-TCA 37112 Query 104705 A-CAGTCGATCCGCCACAAATTCGATGTACT 104734 | ||| |||||||||||||| |||| |||| Sbjct 37113 AGCAGACGATCCGCCACAAAAGCGATATACT 37143 >seq32 Length=1481398 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 104608 TTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTC 104667 || || |||||||| ||||| || | || ||||| | | |||||| ||||| |||||| Sbjct 1084590 TTCTCGAAAAAATTGGTCTTCCCTTGCAACGAAATCATGTCCATAAAGTCGAATGGATTC 1084531 Query 104668 AAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCG 104727 ||| | |||||||| ||| || || || | || || || || || |||||| Sbjct 1084530 GAAGCGCCATAATATTTTCCGTTCCCCAGAGATATGAGCAATCTGTCGGCGACGAATTCG 1084471 Query 104728 ATGTACTCGCACATAGAATGT-GCATTCATGCC 104759 ||||||| |||||| || ||| |||||||| || Sbjct 1084470 ATGTACTGGCACAT-GAGTGTCGCATTCATACC 1084439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429879965097570