Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq32 147 3e-30 seq925 131 2e-25 seq1000 122 1e-22 seq434 105 8e-18 seq247 100 4e-16 >seq32 Length=1481398 Score = 147 bits (162), Expect = 3e-30 Identities = 310/460 (67%), Gaps = 7/460 (2%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| | ||||||||||||| ||| | |||||||||| |||||| | || |||||| Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || || ||||| || ||||| || || | ||| ||||| || ||||| || ||| Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 32828 |||||||| || ||||| || || |||||||||| || | || | | | Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 |||| ||||| ||| |||||||||| || || || | ||||| || || ||| Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAA 32946 || || | || || | | || | ||| || | || ||| || | || Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAG 33006 || |||| |||| ||||| || || || || |||||||| || |||||| | | | Sbjct 1083977 GA--ATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCG 1083920 Query 33007 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 |||||| | ||| ||||| |||||| | ||| | | || || || || || || | Sbjct 1083919 CCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCAT 1083860 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 33106 | ||| ||||| || || | ||||| ||||||||| Sbjct 1083859 CTGAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATA 1083820 >seq925 Length=43645 Score = 131 bits (144), Expect = 2e-25 Identities = 294/435 (68%), Gaps = 9/435 (2%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| |||||||| ||| |||||||| |||| || || | ||||| | |||| Sbjct 13681 CATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGA 13740 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||||| ||||| | || | || || | |||||| || | || ||||| || ||||| Sbjct 13741 TAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAA 13800 Query 32777 GAAAATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATAACCGGCGCT----G 32831 |||||| |||||||| || |||| ||| || || || || ||| | | | Sbjct 13801 GAAAATCCCTTCTACGCATGCGAAAGCCAACAA-TCGTTCACC-GAACGTTCTTTCCTCG 13858 Query 32832 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 32891 ||| |||||| | ||||||||| || || || || || ||||| ||||| || || Sbjct 13859 TCAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCATC 13918 Query 32892 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 32951 ||||| || || | | || |||| || || || | ||| | || |||||||| | Sbjct 13919 GCATTGAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGAA 13978 Query 32952 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCG 33011 |||| |||||| || | |||||| || | ||||| ||||||||| | | || || Sbjct 13979 TACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTCC 14038 Query 33012 GTAATCTGTACTTC-TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070 | ||||| || |||| | ||| | || || || ||||| ||||| || Sbjct 14039 AAAGGGCCGACTTCTTGCGCAAAGT-TTTCCACCAAGTTCTCGTTCACGATTCCATCGGA 14097 Query 33071 GGCTGCAAAAAACGC 33085 ||||||||||| || Sbjct 14098 TGCTGCAAAAAAAGC 14112 >seq1000 Length=18647 Score = 122 bits (134), Expect = 1e-22 Identities = 228/331 (69%), Gaps = 7/331 (2%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| ||| || ||||| ||| || || |||||||| | ||| || ||||| ||||| Sbjct 12410 AACAGCAAGCACGCGAAGTCGGTATGGAGGCCCTCGTCACAACTGATCAATTCATTGGAG 12351 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || | ||| ||||| || || ||||| || | |||||| || | |||||||| || Sbjct 12350 AAAGTCAATCCAGGCATGAGCCCTCGCTTCTTGATCCAAAAGATAGCTGCAAATGAGCCG 12291 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCG-GCG 32828 ||||||||||| ||||| || | ||| || | ||| | ||| | | |||| | | Sbjct 12290 GAAAAGAAAATGCCTTCAACACAGGAAAATGCCAAAAGACGCTCAGCGAACGACCGCGAG 12231 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 | ||| ||||| | ||||| || |||||||| || || ||||||| || || Sbjct 12230 CGGTCGGTAATCCATGTCATCGCCCATTCTGCCTTCTTCTTCACGCAAGGCACAGTTTCG 12171 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAA 32946 ||||| || || || || || || || ||| | | || || || || | || Sbjct 12170 ATAGCGTTGAAAAGTAAGGCCTTCTCCTTGGGATCGGTGATGTAGGTGTCGATTAACAAG 12111 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAAT 32977 || ||| |||| ||||||| |||||||| Sbjct 12110 GAGTAT--GTTTCAGAATGAACATTTTCAAT 12082 >seq434 Length=244965 Score = 105 bits (116), Expect = 8e-18 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 63083 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63141 || || ||||| ||||| || || || ||| |||||||| | ||| ||| || || || Sbjct 87307 AAAAGGTCAGGGATCCACAGCGCGTAGAAA-AGATCTCTTGCCCTAGATTCTTCCTTGCC 87365 Query 63142 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63201 |||||| | ||||||||| | | | ||||| |||||| ||||| | ||| || Sbjct 87366 ATGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGAT 87425 Query 63202 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63261 || | |||| || || ||||||||||| ||||| | ||| | ||| ||| || ||| Sbjct 87426 CGCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCAGTGGCATCATA 87485 Query 63262 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 63306 | | | | |||||| | || ||||| || |||||||||||| Sbjct 87486 AGCACGAAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCC 87530 >seq247 Length=45445 Score = 100 bits (110), Expect = 4e-16 Identities = 358/548 (65%), Gaps = 25/548 (5%) Strand=Plus/Plus Query 32676 TGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 32735 || || || |||||||| || |||| |||||| ||||| || | || ||||| || || Sbjct 37348 TGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAAAAAGTTAAGCCTGGCATAAGCCC- 37406 Query 32736 CGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCC 32795 || || |||| |||||| | | ||||| ||||| || |||||||| ||||| || | Sbjct 37407 CGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCGGAGAAGAAAATGCCTTCCACACAC 37466 Query 32796 GCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTG--TCATGTATCCACTTTTGAGC 32851 |||||||||| | | || | || |||| || |||| ||||| || || Sbjct 37467 GCAAAGGCAACCAAACGTTCGGGA-AAGAGGCGGATTGGATCATTAATCCATTTCAATGC 37525 Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911 ||| | || || | | | ||| || || ||||| ||||| || |||||| | Sbjct 37526 CCAGTTCGCTTTTTCCTGGATACAGGGAATAGTCTCGATAGCGTTGAAGAGACGGGCCCG 37585 Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAA--AAGACTATACATTTCCGAATGAATG 32969 ||| | || || || ||| ||||| ||||| || ||| | || || |||| Sbjct 37586 TTCCGTGCTGTCACGAATATAGGTATCTATCAAGGTCGAATATGC--CTCGGAGTGAACA 37643 Query 32970 TTTTCAATGGCCAT---TTGAAATCCGTAGAAGCATCTAGCCTC---GGTAATCTGTACT 33023 ||||| || ||| ||| || ||||| ||| | ||||| || | | | | Sbjct 37644 TTTTCGAT---CATTGATTGGAAACCGTAAAAGGCACGGGCCTCCCAGGGA--CCG-ATC 37697 Query 33024 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33083 ||| | | || ||||| |||||||| || || || ||||| |||||| || || Sbjct 37698 TCTTGAGAGAACCGTTCCAGCAAATTTTCGTTAACGATGCCGTCCGAGGCTGCGAAGAAG 37757 Query 33084 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTG 33140 |||| |||||| | ||||| | | || || | | | || | ||| || Sbjct 37758 GCCAGCACATGTGACAAAAAATGTCTGTCATCGTTCGACAGACGGTTCTCCCAGTCGCCC 37817 Query 33141 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33200 | |||| | | ||| | || ||||| ||||| ||||| ||||| ||||| |||||| Sbjct 37818 AAATCTGAACGAAGATCAAGCTCCTCCACGGTCCAGAATGACGCCTCCGCCTTCTTATAC 37877 Query 33201 ATATTCCA 33208 || | ||| Sbjct 37878 ATCTGCCA 37885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633547299242400