Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq32 170 2e-37 seq1000 143 3e-29 seq179 141 1e-28 seq925 116 4e-21 seq247 105 7e-18 >seq32 Length=1481398 Score = 170 bits (188), Expect = 2e-37 Identities = 375/559 (67%), Gaps = 5/559 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | |||||||| || || | ||||||| || || | Sbjct 1082046 GCATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAG 1082105 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || ||||| ||||| | ||| || || || || ||| || || || || Sbjct 1082106 GCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAA 1082165 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGC 93269 || ||||| || || ||||| ||||| | ||||| ||||| ||| | | | | Sbjct 1082166 GATGCCTTCAACAGCAGCAAACGCCACCAAGCGTTCACCAAAAGTTGACCGTCGGTC-GG 1082224 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||| || | ||||| || || || ||| | ||| || | || || | |||| Sbjct 1082225 AGATCCAGTTCAGTGCCCAGTCTGCCTTGCGCTTGACACACGGAATGGTCTCCACGGCGT 1082284 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 || ||||| || || ||| | | || || || || ||||| | || |||||| Sbjct 1082285 CGAAAAGGTACTCGCGTTCGGCAGCGTCCTTGATATAGGTGTCGATGAGAAGCGAATACG 1082344 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || || | |||||||| |||||||| || |||||||||| ||| || | | Sbjct 1082345 TCTCTGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAACATCGAGCCTCGGCAA 1082404 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 || || || | ||||| | ||| || || || || ||||| |||||||| || |||| Sbjct 1082405 CTTGGACCTCGTTGGAAAAGCGCTCGACAAGGTTCTCGTTGACAATACCATCCGAGGCTG 1082464 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCC 93566 | || ||||| | | ||| || ||||| ||| | || |||| | | || Sbjct 1082465 CGAAGAAAGCGAGGACATGGGAGATGAAATGGCGCTCGTTGTCGTTAAGGCGGGTGGTCC 1082524 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | || | |||||| || || || | ||| || ||||||||||||| || || || | Sbjct 1082525 AGTCATGAATATCTTTCGAGAGGTCCATTTCCTCTGCAGTCCAAAACGACGCCTCAGCCT 1082584 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 1082585 TCTTGTACATTTGCCAGAT 1082603 >seq1000 Length=18647 Score = 143 bits (158), Expect = 3e-29 Identities = 292/434 (67%), Gaps = 0/434 (0%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 |||||||| ||||||||||| | || ||||| | ||||| |||||| ||| || Sbjct 12404 AAGCACGCGAAGTCGGTATGGAGGCCCTCGTCACAACTGATCAATTCATTGGAGAAAGTC 12345 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 || || || | || ||||| ||||||| |||||| || | ||||| || ||||| Sbjct 12344 AATCCAGGCATGAGCCCTCGCTTCTTGATCCAAAAGATAGCTGCAAATGAGCCGGAAAAG 12285 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || || ||||| || | |||||||| || ||| || || || || | Sbjct 12284 AAAATGCCTTCAACACAGGAAAATGCCAAAAGACGCTCAGCGAACGACCGCGAGCGGTCG 12225 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 | |||||| | | ||||| || || || ||||| | ||||| | |||||||||||| Sbjct 12224 GTAATCCATGTCATCGCCCATTCTGCCTTCTTCTTCACGCAAGGCACAGTTTCGATAGCG 12165 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || || | | ||| | | ||| ||||| || |||||||||| || || Sbjct 12164 TTGAAAAGTAAGGCCTTCTCCTTGGGATCGGTGATGTAGGTGTCGATTAACAAGGAGTAT 12105 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 |||||||||| ||||| || || | ||||| | |||||| | |||||| | Sbjct 12104 GTTTCAGAATGAACATTTTCAATCATGACCTGGAAGGCATAGAAAGCCCAAGCTTCTCTC 12045 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 | || || |||| || | || | | || || ||||| || |||||||| || Sbjct 12044 GGCGAAACCTCCTGAGCGAAATTTTCCAGCAAGTTCTCGTTGACAATTCCATCGGACGCC 11985 Query 93509 GCaaaaaaaGCCAA 93522 |||||||||||||| Sbjct 11984 GCAAAAAAAGCCAA 11971 >seq179 Length=47363 Score = 141 bits (156), Expect = 1e-28 Identities = 375/561 (67%), Gaps = 20/561 (4%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTAA 93150 || || ||||||||||||| |||||| |||| || | || | ||||||| ||| || || Sbjct 9361 CATGCGAAGTCGGTATGTAGACCTTCATCTC-TGCTGATAAGCTCATTGGAGAAAGTCAA 9303 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||||| | || || |||||||| |||||||| || | || || |||||||||||| Sbjct 9302 TCCTGGCATCACACCACGTTTCTTCAGCCAAAAAATGGCCGCGAAGGAACCAGAAAAAAA 9243 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAA--TACGTTCGGCAAA---ATTTGCGGAATTA 93265 || ||||||||| ||||| || || | | ||| |||| | ||||||| Sbjct 9242 GATGCCTTCCACGCAGGCAAAGGCTACGAGGTGGCTTC--CAAAGGCAACCGCGGAAT-- 9187 Query 93266 CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATA 93325 || | ||||||||| || |||||||| || ||| | || || || | |||||| | Sbjct 9186 CTTC-GATCCATTTCAATGCCCAATCCGCCTTTCTTTTGATGCACTCCATTGTTTCAAGC 9128 Query 93326 GCGTTAAATAG--GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAG 93383 || | || || |||||| |||| | ||| | || || ||||| | | || Sbjct 9127 GCATCGAAGAGATGTAATCGTTCTCG--GGTGTCTGCAACATAGGTGTCGATGAGTAAAG 9070 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 ||||| |||| |||||||| || || || ||| || || ||||| || | | ||||| Sbjct 9069 AATACGTTTCGGAATGGACGTTTTCGATCATAATCTGAAAACCGTAAAACGAGCGAGCTT 9010 Query 93444 CCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 || | | ||| | | || | | ||| || ||||| || || || || || | Sbjct 9009 CCAAAGGCCCAATTTCGCAACAGAAGTTTTGTACAAGGTTTTCGTTCACGATGCCGTCAG 8950 Query 93504 ATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCT 93560 | || |||||||| || | | ||| | || ||| || | || || | Sbjct 8949 ACGCAGCAAAAAATGCAAGGACATGGGTGATGAAAAACCGTTCGTTTGCTGAAAGGCGAG 8890 Query 93561 TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTT 93620 | |||||||| ||||| | ||||| ||| ||||| |||||||| || |||| Sbjct 8889 TCTCCCAATCATTAAGATCGGACCGCAAATCGAGTTCATCGACCGTCCAAAAAGACGCTT 8830 Query 93621 CTGCTTTTTTGTACAT-ATCC 93640 | |||| |||||||| |||| Sbjct 8829 CGGCTTGCTTGTACATCATCC 8809 >seq925 Length=43645 Score = 116 bits (128), Expect = 4e-21 Identities = 292/436 (67%), Gaps = 16/436 (4%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAATGTTA 93149 ||||| || || || || | ||| || ||||| ||||| | ||| || ||| | || Sbjct 13685 CACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATA--AGCTCGTTTGCGAACGATA 13742 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 ||||| | || || | |||||| | |||||| || | || || || ||||| | Sbjct 13743 GTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAAGA 13802 Query 93210 aTATACCTTCCACGGCTGCAAATGCCA-CAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 | || ||||| ||| ||| || |||| |||| ||||| | || || || || Sbjct 13803 AAATCCCTTCTACGCATGCGAAAGCCAACAAT-CGTTCACCGAACGTTCT----TTCCTC 13857 Query 93269 CTGA----TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324 | | |||| | ||||||||||| ||||||||||| | ||||| | |||||| || Sbjct 13858 GTCAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCAT 13917 Query 93325 AGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGA 93384 || || ||||| | || |||| || || || | ||||| || || || Sbjct 13918 CGCATTGAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGA 13977 Query 93385 ATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTC 93444 ||||| ||| || ||||| || || || | || || |||||||| | | ||||| Sbjct 13978 ATACACTTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTC 14037 Query 93445 C-GTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 | | | | |||||||| | ||| | || || | || || || || || ||||||| Sbjct 14038 CAAAGGGCCG-ACTTCTTGCGCAAAGTTTTCCACCAAGTTCTCGTTCACGATTCCATCGG 14096 Query 93504 ATGCTGCaaaaaaaGC 93519 |||||||||||||||| Sbjct 14097 ATGCTGCAAAAAAAGC 14112 >seq247 Length=45445 Score = 105 bits (116), Expect = 7e-18 Identities = 373/569 (66%), Gaps = 18/569 (3%) Strand=Plus/Plus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTG 93142 ||| || || |||||||| ||||| | |||||||||| || | || | || || Sbjct 37325 ACAATAGACAGGCAAAGTCCGTATGAAGTCCTTCGTCTC-TGCTGATTAGTTCGTTCGAA 37383 Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 || ||||| ||||| | || || |||||||| | |||||| | || ||||| || Sbjct 37384 AAAGTTAAGCCTGGCATAAGCCC-CGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCG 37442 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA 93262 || || || || |||||||| ||||| || || | |||||||| ||| ||||| Sbjct 37443 GAGAAGAAAATGCCTTCCACACACGCAAAGGCAACCAAACGTTCGGGAAAGAG-GCGGAT 37501 Query 93263 TTACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | | | | ||||||| || ||||| | ||||||| || ||||| || | || || Sbjct 37502 TGGATCATTAATCCATTTCAATGCCCAGTTCGCTTTTTCCTGGATACAGGGAATAGTCTC 37561 Query 93322 GATAGCGTTAAATAGGTAATCTCGCT-CGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 ||||||||| || || | || | ||| | || || || || ||||| || || Sbjct 37562 GATAGCGTTGAAGAGACGGGCCCGTTCCGTGC-TGTCACGAATATAGGTATCTATCAAGG 37620 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAAT--TTGGAATCCGTAGAAACATCT 93438 ||||| || || || ||||| || || || | |||||| ||||| || | Sbjct 37621 TCGAATATGCCTCGGAGTGAACATTTTCGAT--CATTGATTGGAAACCGTAAAAGGCACG 37678 Query 93439 AGCTTCC--GTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 || ||| | || | | |||||||| || | || | | |||||| || || || Sbjct 37679 GGCCTCCCAGGGACC--GATCTCTTGAGAGAACCGTTCCAGCAAATTTTCGTTAACGATG 37736 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCAT---CT 93553 || || || ||||| || || |||| | ||| | ||||||| | ||||| | Sbjct 37737 CCGTCCGAGGCTGCGAAGAAGGCCAGCACATGTGACAAAAAATGTCTGTCATCGTTCGAC 37796 Query 93554 TTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAAC 93613 | | || ||||| ||| | |||| |||||| | || || || ||||| || Sbjct 37797 AGACGGTTCTCCCAGTCGCCCAAATCTGAACGAAGATCAAGCTCCTCCACGGTCCAGAAT 37856 Query 93614 GATGCTTCTGCTTTTTTGTACATATCCCA 93642 || || || || || || ||||| | ||| Sbjct 37857 GACGCCTCCGCCTTCTTATACATCTGCCA 37885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556786361632560