Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9840 113 4e-20 >seq9840 Length=425 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | ||| || || || || ||||||||||| Sbjct 263 ATGCCACCACGGAGGCGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCA 204 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| || || ||||| || || ||| | || || ||||| || || ||| Sbjct 203 GAAAGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGA 144 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || ||||||| || | | || | |||||||| || || Sbjct 143 GGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCC 84 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| |||||||||| || || |||||||||||||| Sbjct 83 ACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 || ||| ||| ||||| || || || || | |||||||| ||||| || || ||||| Sbjct 425 GTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATC 366 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| ||||| || || || | | || | || |||| ||||||||| || Sbjct 365 CCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCG 306 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | ||| | || ||||| ||||||||||| || |||||||||||| Sbjct 305 AGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCATG 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420079642570728