Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq32 190 4e-43 seq247 129 1e-24 seq1000 105 1e-17 seq925 96.9 7e-15 >seq32 Length=1481398 Score = 190 bits (210), Expect = 4e-43 Identities = 321/459 (70%), Gaps = 13/459 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || |||||||| ||||| || || || ||||| |||||||| | | | || Sbjct 1082477 CTCGCTTTCTTCGCAGCCTCGGATGGTATTGTCAACGAGAACCTTGTCGAGCGCTTTTCC 1082418 Query 42483 AAAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 || ||||| || | || ||||| || || ||||| |||||||| || || |||| Sbjct 1082417 AACGAGGTCCA--AGTTGCCGAGGCTCGATGTTTCTATGGCTTCCAAATCATGATGGAGA 1082360 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| ||| ||| | || || |||| || ||| ||| | | ||| | Sbjct 1082359 ACATTCACTCAGAGACGTATTCGCTTCTCATCGACACCTATATCAAGGACGCTGCCGAAC 1082300 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || ||| | ||| ||||||| || || || ||||| ||||| ||||||| Sbjct 1082299 GCGAGTACCTTTTCGACGCCGTGGAGACCATTCCGTGTGTCAAGCGCAAGGCAGACTGGG 1082240 Query 42661 CGCTCAACTGGATCGA-GAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 | || ||||||||| || |||||| |||| || || || | |||| || ||| Sbjct 1082239 CACTGAACTGGATCTCCGA---CCGACGGTCAACTTTTGGTGAACGCTTGGTGGCGTTTG 1082183 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 | || || || |||||||||||||||||| | ||||| |||||||||||| | ||| || Sbjct 1082182 CTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGGATGAAGAAGC 1082123 Query 42778 AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGC 42837 | | |||||| || || || || || || || ||||| ||| | ||||| || ||| Sbjct 1082122 GAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGACGAAGGAATGC 1082063 Query 42838 ATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCA 42876 | | |||||||| ||||| || ||| |||||||||| Sbjct 1082062 ACACCGACTTTGCATGCCTTCTCTTC---AGCCACCTCA 1082027 >seq247 Length=45445 Score = 129 bits (142), Expect = 1e-24 Identities = 380/570 (67%), Gaps = 22/570 (4%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT--GGCCAAGG 42366 ||||| ||||||||| || || |||||||| |||||| |||| || | || | Sbjct 37879 ATGTATAAGAAGGCGGAGGCGTCATTCTGGACCGTGGAGGAGCTTGATCTTCGTTCA--G 37822 Query 42367 ACACGGCCGGCTGGGAGTCACTGTCTGA-GAACGA--AAAG---TTTTTCCTCAAAAACA 42420 | || || ||||||| || ||||| |||||| | || ||||| ||| | Sbjct 37821 ATTTGGGCGACTGGGAGA-ACCGTCTGTCGAACGATGACAGACATTTTTTGTCACATG-- 37765 Query 42421 TACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG--GCCACCAGGTT 42478 | |||||||||||||| ||||| |||||||| || || || || || | || |||| Sbjct 37764 TGCTGGCCTTCTTCGCAGCCTCGGACGGCATCGTTAACGAAAATTTGCTGGAAC--GGTT 37707 Query 42479 CATGAAAGAGGTGCAGTACTTTG-AGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAG 42537 | ||||| | | || | | | |||| || ||| ||||| ||||| | || | Sbjct 37706 CTCTCAAGAGAT-CGGTCCCTGGGAGGCCCGTGCCTTTTACGGTTTCCAATCAATGATCG 37648 Query 42538 AGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCG 42597 | || || ||||| |||| || | | || | | || || || | || | | Sbjct 37647 AAAATGTTCACTCCGAGGCATATTCGACCTTGATAGATACCTATATTCGTGACAGCACGG 37588 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 | || | | || ||||| || || ||||| || ||||| ||| || | || ||| ||| Sbjct 37587 AACGGGCCCGTCTCTTCAACGCTATCGAGACTATTCCCTGTATCCAGGAAAAAGCGAACT 37528 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 |||| | || ||||| | ||| | || | ||| ||| | |||| |||||| Sbjct 37527 GGGCATTGAAATGGATTAATGATCCAATCCGCCTCTTTCC-CGAACGTTTGGTTGCCTTT 37469 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | || || ||||| |||||||| || | || || | |||| ||| | ||| | Sbjct 37468 GCGTGTGTGGAAGGCATTTTCTTCTCCGGATCGTTTGCAGCAGTCTTTTGGATTAAGAA- 37410 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 | || | ||||| || | || || ||||||||||| |||||||| ||||| || || Sbjct 37409 ACGGGGCTTATGCCAGGCTTAACTTTTTCGAACGAACTAATCAGCAGAGACGAAGGACTT 37350 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866 |||| |||||||||||| || |||||||| Sbjct 37349 CATACGGACTTTGCCTGTCTATTGTTCTCG 37320 >seq1000 Length=18647 Score = 105 bits (116), Expect = 1e-17 Identities = 182/259 (70%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| || || || || |||| ||| | ||||||||||| || |||||| | | Sbjct 12157 CTTTTCAACGCTATCGAAACTGTGCCTTGCGTGAAGAAGAAGGCAGAATGGGCGATGACA 12216 Query 42669 TGGATCGAGAGTCCCGACGC-AACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||| | | || ||| |||||| ||| | || | || ||| || || || Sbjct 12217 TGGAT-TACCGACCGCTCGCGGTCGTTCGCTGAGCGTCTTTTGGCATTTTCCTGTGTTGA 12275 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGA 42786 ||||| ||||| || ||| | || || | ||||| ||| ||||| || ||| || | Sbjct 12276 AGGCATTTTCTTTTCCGGCTCATTTGCAGCTATCTTTTGGATCAAGAAGCGAGGGCTC-A 12334 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| ||| | || ||||| || ||| | ||||| | |||||||| || |||| |||| Sbjct 12335 TGCCTGGATTGACTTTCTCCAATGAATTGATCAGTTGTGACGAGGGCCTCCATACCGACT 12394 Query 42847 TTGCCTGCCTCCTGTTCTC 42865 | || ||| | |||||||| Sbjct 12395 TCGCGTGCTTGCTGTTCTC 12413 >seq925 Length=43645 Score = 96.9 bits (106), Expect = 7e-15 Identities = 232/347 (67%), Gaps = 12/347 (3%) Strand=Plus/Minus Query 42498 TTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTG 42557 || || || || | |||||||||||| ||| | || || ||||| ||||| || ||| Sbjct 14040 TTGGAAGCCCGTTACTTCTACGGCTTTCAGTTCATGATCGAAAACGTCCACTCGGAAGTG 13981 Query 42558 TACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAG 42617 || | || || ||| || ||| ||| | ||| | | || || ||||| Sbjct 13980 TATTCGCTTTTGATCGACAGTTATATCAAGGACGACAACGAAAGAAGCGAACTATTCAAT 13921 Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677 || ||||| || || || ||| | ||||| || || || ||||| | | ||||| Sbjct 13920 GCGATGGAAACAATTCCTTGCGTGAAGAAAAAAGCAGATTGGGCTTTGACTTGGAT---A 13864 Query 42678 AGTCCCGACG---CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC---CGTCGAGGGC 42731 | | ||| | ||||||||| || | | | || | |||| ||| ||| || || Sbjct 13863 ACTGACGAGGAAAGAACGTTCGGTGA-ACGATTGTTGGCTTT--CGCATGCGTAGAAGGG 13807 Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCC 42791 || ||||| || ||| | |||||| | ||||| ||| | ||| | | || | |||||| Sbjct 13806 ATTTTCTTTTCCGGCTCATTCGCCGCGATCTTTTGGTTGAAGAAAAGGGGTTTGATGCCA 13747 Query 42792 GGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 ||||| | ||| | ||||| || |||||| | || ||||| || || Sbjct 13746 GGACTATCGTTCGCAAACGAGCTTATCAGCCGAGATGAGGGTCTTCA 13700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944212965457440