Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq9840 118 1e-21 seq32 96.9 3e-15 >seq9840 Length=425 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| |||||||| ||||| ||||| || ||||| Sbjct 263 ATGCCACCACGGAGGCGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCA 204 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || | ||| || || ||| | || | || ||||| || || Sbjct 203 GAAAGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGA 144 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || ||||| ||||| ||| |||| || | ||||||||||||||| Sbjct 143 GGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCC 84 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||| |||||||| | || || |||||||| ||||| Sbjct 83 ACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Score = 86.0 bits (94), Expect = 6e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 45216 CGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTAC 45274 ||||| || || |||||||| ||||| || ||||| ||||| |||| || | || | Sbjct 386 CGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGGATTTTCGCCTTGA-CGTTGTCGAT 328 Query 45275 GGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAAT 45334 || ||||| || ||||||||||| || | || ||||| || |||||||| || ||||| Sbjct 327 AGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAAAT 268 Query 45335 TTGCAT 45340 ||||| Sbjct 267 CTGCAT 262 >seq32 Length=1481398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 138380 GCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAG 138439 ||| ||||||| |||||| | ||||||||||| || || || ||| ||| ||||| Sbjct 1082046 GCATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAG 1082105 Query 138440 CCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaa 138499 || ||||| | |||| |||| || | ||||||| ||||||| |||||| || || Sbjct 1082106 GCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAA 1082165 Query 138500 aaCGCCTTCGACAATAGCGAAAGCCACCATGCG 138532 | |||||| ||| ||| || ||||||| ||| Sbjct 1082166 GATGCCTTCAACAGCAGCAAACGCCACCAAGCG 1082198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451942778472240