Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9840 100 1e-15 seq3971 87.8 7e-12 seq2021 87.8 7e-12 >seq9840 Length=425 Score = 100 bits (110), Expect = 1e-15 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||| || || || || || || || || ||||| || Sbjct 262 ATGCAGATTTTCGTCAAAACTCTGACAGGCAAGACCATCACCCTCGAAGTCGAATCCTCC 321 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | || ||||| ||||| |||||||| ||||| ||||||||| Sbjct 322 GATACTATCGACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGGATTCCGCCTGATCAA 381 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 |||||| | ||||| | || || || ||||| ||||| Sbjct 382 CAACGTCTCATTTTTGCCGGCAAGCAGCTTGAGGATGG 419 >seq3971 Length=6525 Score = 87.8 bits (96), Expect = 7e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| ||||||||||| || ||||| || || ||||| || || || ||| |||| Sbjct 6461 CTCCCGAAGAAATTTCTTCCATGGTCCTCCTCAAGATGAAGGAGACTGCTGAATCATATC 6402 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||| | | || || |||||||| ||||| || || || || | |||| Sbjct 6401 TCGGCGTTCCGACAAACAACGCTGTCATTACTGTCCCCGCGTACTTTAACGACTCCCAAC 6342 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || ||||| || || || | ||| | || || |||||||| || || | Sbjct 6341 GTCAAGCCACAAAAGACGCCGGCACGATCTCGGGTATGAACGTGCTTCGAATCATCAACG 6282 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACT 451452 | || || || |||||| | || ||||| || Sbjct 6281 AGCCCACGGCCGCTGCTATCGCCTATGGTCT 6251 >seq2021 Length=7336 Score = 87.8 bits (96), Expect = 7e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || || || || | || || || || || Sbjct 58 ATGCAAATCTTCGTGAAGACTTTGACGGGAAAGACGATCACGTTGGAAGTCGAGTCTTCG 117 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || || ||||| |||||||| || ||||||||||| || Sbjct 118 GATACGATTGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAG 177 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | ||||| || | || || || | |||||| ||||||| ||| Sbjct 178 CAGCGCCTCATCTTTGCCGGGAAGCAGTTGGAGGACGGGCGTACTTTGTCGGATTACAAT 237 Query 391230 ATTGATAAGGATGCAACACTTCACTT 391255 ||| | ||||| || |||||||| Sbjct 238 ATTCAGAAGGAGAGCACCCTTCACTT 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975447693238952