Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3971 192 7e-44 seq3972 183 4e-41 seq776 140 4e-28 seq5262 102 1e-16 seq2435 96.9 4e-15 seq247 82.4 1e-10 >seq3971 Length=6525 Score = 192 bits (212), Expect = 7e-44 Identities = 293/416 (70%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 || ||| | ||||| | ||| || || ||||| | | |||||| | ||| | | Sbjct 6044 GACATACCCTTCTTGTTTTTGCGCTTGAACTCCTGGGCGAAGTGGTTCACGAGGCGATTA 6103 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| ||||||||||| ||||| || || || || || || || || |||||||| Sbjct 6104 TCGAAATCCTCACCACCCAAATGTGTGTCTCCGGCAGTAGCCTTAACCTCGAAGATACCC 6163 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | | |||||||| || || || ||||| || || || ||||| ||| Sbjct 6164 TCCTCGATCGTCAGGAGAGAAACATCGAAAGTTCCTCCACCGAGATCGAAGATGAGGACG 6223 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || | ||||| |||||||| || |||||||| || ||||| || || Sbjct 6224 TTGCGCTCGCCGACAACCTTCTTGTCGAGACCATAGGCGATAGCAGCGGCCGTGGGCTCG 6283 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || ||||| ||||| || | || || | || ||||| || ||||| ||| Sbjct 6284 TTGATGATTCGAAGCACGTTCATACCCGAGATCGTGCCGGCGTCTTTTGTGGCTTGACGT 6343 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA---CCG 7753 || || ||||||||||| || ||||| || | ||| |||| || | || | ||| Sbjct 6344 TGGGAGTCGTTAAAGTACGCGGGGACAGTAATGACAGCGT---TGTTTGTCGGAACGCCG 6400 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||||| ||||| || | || ||||| ||| || ||||| || ||||| ||||| Sbjct 6401 AGATATGATTCAGCAGTCTCCTTCATCTTGAGGAGGACCATGGAAGAAATTTCTTC 6456 Score = 150 bits (166), Expect = 2e-31 Identities = 266/386 (69%), Gaps = 4/386 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || || || ||||| | || ||||||||||| ||||| |||||||| || | || || Sbjct 5614 ATAGCCGCCTGGACGGCAGCACCGTATGCGACAGCCTCGTCGGGGTTGATGCTCTTGTTG 5673 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG--ATTCGTGTCG 7139 | || || ||||| || | ||||| | | | ||| | |||| || || |||| Sbjct 5674 GGCTCCTTGCCGTTGAAGAAGTCCGACACAAGCT--TGACGATGCGGGGAATACGGGTCG 5731 Query 7140 ATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTG 7199 | |||||||| | ||||| || | || ||||| || |||||||| || || ||||| Sbjct 5732 AGCCACCGACGAGGACGATCTCGTGGACGTTCGACTTGTCGATCTTGGAATCGCGAAGGA 5791 Query 7200 TTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259 |||||||| || || | ||||| | ||| ||||||||||| ||||| | Sbjct 5792 CCTTTTCGACGGGCTCGAGGGTGCCGCGGAAGAGATCCTGGCACAGTTCCTCGAAACGGG 5851 Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 ||||||| | || || ||||| || | || ||| | | || ||||| ||||||| | Sbjct 5852 CACGGGTGAGCGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCAATCTCAATGGAGG 5911 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 |||| | | || || | || ||||| || || || || || || || | ||| || | Sbjct 5912 TTTGAGTAGCGGAGGAGAGGGTGCGCTTGGCACGTTCGCAGGCAGTGCGGAGACGGCGGA 5971 Query 7380 GGGCACGCGGGTTACCGGAAATATCT 7405 ||||| ||||| |||||| |||| Sbjct 5972 CTGCACGAGGGTTGGCGGAAAGATCT 5997 >seq3972 Length=6428 Score = 183 bits (202), Expect = 4e-41 Identities = 291/416 (70%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 || ||| | ||||| | ||| || || || || | | |||||| | ||| | | Sbjct 5947 GACATACCCTTCTTGTTTTTGCGCTTGAATTCCTGGGCGAAGTGGTTCACGAGGCGGTTA 6006 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||| |||||||| || || || || || || || |||||||| Sbjct 6007 TCGAAATCCTCACCACCCAGATGTGTATCTCCGGCAGTAGCCTTAACCTCGAAGATACCC 6066 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | | |||||||| || || || ||||| || || || ||||| ||| Sbjct 6067 TCCTCGATCGTCAGGAGAGAAACATCGAAAGTTCCTCCACCGAGATCGAAGATGAGGACG 6126 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || | ||||| |||||||| || ||||| || || ||||| || || Sbjct 6127 TTGCGCTCGCCGACAACCTTCTTGTCGAGACCATAGGCGATGGCAGCGGCCGTGGGCTCG 6186 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||||||||| ||||| || | || || | |||||||| || ||||| || Sbjct 6187 TTGATAATACGAAGCACGTTCATACCCGAGATCGTGCCGGCATCTTTTGTGGCTTGACGC 6246 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA---CCG 7753 || || ||||| ||||| || ||||| || | ||| |||| || | || | ||| Sbjct 6247 TGGGAGTCGTTGAAGTACGCGGGGACAGTAATGACAGCGT---TGTTTGTCGGAACGCCG 6303 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||||| ||||| || | || ||||| ||| || ||||| || || || ||||| Sbjct 6304 AGATAAGATTCAGCAGTCTCCTTCATCTTGAGGAGGACCATGGAAGAGATTTCTTC 6359 Score = 138 bits (152), Expect = 1e-27 Identities = 263/385 (68%), Gaps = 2/385 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || || || ||||| | || ||||||||||| ||||| |||||||| || | || || Sbjct 5517 ATAGCCGCCTGGACGGCAGCACCGTATGCGACAGCCTCGTCGGGGTTGATGCTCTTGTTG 5576 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATA-ACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 | || || ||||| || | ||||| | | ||| | || || || || ||||| Sbjct 5577 GGCTCCTTGCCGTTGAAGAAGTCCGACACAAGCTTGACG-ATGCGAGGAATACGGGTCGA 5635 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 |||||||| | ||||| || | || ||||| || |||||||| || || ||||| Sbjct 5636 GCCACCGACGAGGACGATCTCGTGGACGTTCGACTTGTCGATCTTGGAATCGCGAAGGAC 5695 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 || ||||| || || | ||||| | ||| || |||||||| ||||| || Sbjct 5696 CTTCTCGACGGGCTCGAGGGTGCCGCGGAAGAGATCCTGGCAGAGTTCCTCGAAACGGGC 5755 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 |||||| | || || ||||| || | || ||| | | || ||||| ||||||| || Sbjct 5756 ACGGGTGAGCGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCAATCTCAATGGAGGT 5815 Query 7321 TTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 ||| | | || || | || ||||| || || || || || || || | ||| || | Sbjct 5816 TTGAGTGGCGGAGGAGAGGGTGCGCTTGGCACGTTCGCAGGCAGTGCGGAGACGGCGGAC 5875 Query 7381 GGCACGCGGGTTACCGGAAATATCT 7405 ||||| ||||| |||||| |||| Sbjct 5876 TGCACGAGGGTTGGCGGAAAGATCT 5900 >seq776 Length=169263 Score = 140 bits (154), Expect = 4e-28 Identities = 194/269 (72%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||||||||||||||| || || || || || || || ||||| | || | |||| Sbjct 152043 TCGAAATCTTCACCACCCAAATGGGTGTCACCGGCAGTGGCCTTGACGGCGAACACACCT 151984 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | || || ||||| || || || || || || || || ||||| ||| Sbjct 151983 CCGCTGATGTTGAGCAGGGATACATCGAAAGTTCCTCCGCCGAGATCGAAGATGAGCACG 151924 Query 7577 TTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | || || |||| ||| | || || ||||| || ||||| || ||||| || Sbjct 151923 TTCTTCTC--CG-CTTTTGTCTGACGGTCAAGGCCGTAGGCAATAGCAGCAGCCGTGGGC 151867 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || ||||| ||| | || ||||| || | | |||||||| || || | Sbjct 151866 TCGTTGATGATACGGAGAACATCGAGACCAGCGATGGCGCCAGCATCTTTGGTGGCCAGA 151807 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||||||||||||| ||||| || ||||| Sbjct 151806 CGTTGCGAATCGTTGAAGTACGCAGGGAC 151778 >seq5262 Length=2294 Score = 102 bits (112), Expect = 1e-16 Identities = 114/152 (75%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||||||| ||| ||||| || || || ||||| ||||||||| | Sbjct 215 GTGTTGTGGGGGTTCATGGCGACTTGATTCTTTGCGGCATCACCGATCAGACGTTCACTC 274 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | | || | ||| || ||||| || || || || || |||||||| || || || Sbjct 275 TCT---GAGAAAGAGACATAGGATGGAGTGGTCCGGTTACCCTGGTCGTTGGCGATGATC 331 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || |||||||||||||| ||||| || Sbjct 332 TCAACCCGATCGTTTTGCCAGACACCGACACA 363 >seq2435 Length=16998 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/426 (66%), Gaps = 19/426 (4%) Strand=Plus/Minus Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG--TCGAAGGAGTCTCG 7454 || ||| | || || | ||| || || ||||||| | ||||| ||| ||| | Sbjct 8781 GACATACCCTTTTTCTTTTTGCGCTTGAACTCTTGGGCGAAGTCGTTCGC--GAGGCGGT 8724 Query 7455 AATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATAC 7514 ||||||||| ||||||||||| || | || || || || || || || || |||| || Sbjct 8723 TATCGAAATCCTCACCACCCAAATGCATGTCTCCAGCAGTAGCCTTAACCTCGAAGAAAC 8664 Query 7515 CTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 | | || || | | | ||||||| || || || ||| || || || ||||| Sbjct 8663 CCTCCTCGATTGTCAGTAGAGAAACATTGAAAGTTCCTCCATTGAGATCGAAGATGAGGG 8604 Query 7575 CGTT---CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT-----AGCCGCCGC 7626 | || | | | | | || ||||| ||||| || || || || || || || Sbjct 8603 CATTGCGCCCACTGACAACCTTCTTCTTTTCGAGGCCATAGGCCATCAAAAGGCAGCGGC 8544 Query 7627 CGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 | | || || || || ||||| || ||||| ||| | || | ||||| |||||| | Sbjct 8543 CATGGGCTCGTTGATGATACGCAGGACGTTCATGCCCGAGATCG-TGCCGGATCTTTTGC 8485 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 ||||| || || || | |||||| || || ||||| || | ||| |||| || | | Sbjct 8484 GGCTTGACGCTGGGAGTTGTTAAAATACGCAGGGACAGTGATGACAGCGT---TGCTTGT 8428 Query 7747 ---CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAAT 7803 |||||||| ||||| || | || ||||| ||| || ||||| || ||||| Sbjct 8427 GGGGACGCCGAGATAAGATTCAGCAGTCTCCTTCATCTTGAGGAGGACCATGGAAGAAAT 8368 Query 7804 CTCTTC 7809 ||||| Sbjct 8367 TTCTTC 8362 >seq247 Length=45445 Score = 82.4 bits (90), Expect = 1e-10 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 115369 CCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCTGGAAGTAACCCTCTCTTT 115428 ||||| |||| || || ||||| || |||| ||| ||||| | ||| || | || Sbjct 37354 CCTTCGTCTCTGCTGATTAGTTCGTTCGAAAAAGTTAAGCCTGGCA-TAAGCCCCGTTTC 37412 Query 115429 TTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACACACGCAAAG 115488 || | |||||| | || ||| || |||||||| || ||||| |||||||||||| Sbjct 37413 TTAATCCAAAAGACTGCTGCAAACGATCCGGAGAAGAAAATGCCTTCCACACACGCAAAG 37472 Query 115489 GCTAATAAACGTTCAGCAAATGGTCG---TTTCTTATCAAACCACTTCATAGCCCATTTC 115545 || | |||||||| | ||| | || | | || || ||| |||| ||||| ||| Sbjct 37473 GCAACCAAACGTTCGGGAAAGAGGCGGATTGGATCATTAATCCATTTCAATGCCCAGTTC 37532 Query 115546 GCCTTTCTTTCGATACACGGAATTGT 115571 || ||| | |||||| ||||| || Sbjct 37533 GCTTTTTCCTGGATACAGGGAATAGT 37558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635047898622960