Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9206 147 5e-30 seq9840 145 2e-29 seq2021 143 6e-29 seq9278 102 2e-16 seq1421 102 2e-16 seq1422 96.9 8e-15 seq9205 93.3 9e-14 seq7286 89.7 1e-12 >seq9206 Length=299 Score = 147 bits (162), Expect = 5e-30 Identities = 134/169 (79%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||||||||| || ||||| |||||||| | |||||| | |||||||| | Sbjct 175 CAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 116 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| | || |||||||| || || || || || ||||| || | Sbjct 115 GCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGA 56 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 | || ||||||||| |||||||| ||||| || ||||| ||||| Sbjct 55 TCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGT 7 >seq9840 Length=425 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || || || ||||| || || || |||||||| | |||||||| || || || Sbjct 243 AACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCGTCCTC 184 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| || ||||| || || || || || || ||||||||||| || || || || Sbjct 183 GAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTG 124 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| ||| |||||| || || |||||||| ||| |||||||| || || | |||||| Sbjct 123 AATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGTCTT 64 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 63 GCCGGTCAATGTCTTCACAAAAATCTGCAT 34 >seq2021 Length=7336 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||| ||| || |||||||||||||| | | ||| | ||| || || | ||| Sbjct 261 GTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAACTG 202 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || ||||| ||||||||||| || || || ||||| || Sbjct 201 CTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTT 142 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| || |||||| || ||||| | || | ||||||||| || Sbjct 141 CGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGT 82 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 |||||| || ||||| | |||||| Sbjct 81 CAAAGTCTTCACGAAGATTTGCAT 58 >seq9278 Length=305 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || ||||| ||||| || ||||| || ||||||| |||||| | ||| || |||||| Sbjct 190 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 249 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || || ||||| | || |||||||| || |||||||| || ||||| || Sbjct 250 TGCTTGCCCGCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTG 305 >seq1421 Length=2902 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| ||||| ||||| || | || || | |||||||||| Sbjct 2827 ACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCG 2768 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || || ||||| || || |||||||| || || |||| Sbjct 2767 AGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGGGATGC 2722 >seq1422 Length=2909 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| ||||| ||||| || | || || | ||||||||| Sbjct 2834 ACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCA 2775 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || || ||||| || || |||||||| || || |||| Sbjct 2774 AGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGGGATGC 2729 >seq9205 Length=338 Score = 93.3 bits (102), Expect = 9e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || ||||| ||||| || ||||| || ||||||| |||||| | || || |||||| Sbjct 223 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGC 282 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || |||||||| | || || ||||| || ||||| || || ||||| || Sbjct 283 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 338 >seq7286 Length=304 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| || || | ||||| || Sbjct 1 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCA 60 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || ||||||||||| ||||||||||| ||||| || Sbjct 61 AGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTCGGGAGGGAT 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109329582298298