Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7289 87.8 1e-12 seq7290 82.4 5e-11 >seq7289 Length=746 Score = 87.8 bits (96), Expect = 1e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| |||||| ||||| | || || ||||| |||||||| || Sbjct 1 TCCTTCTGAATGTTATAGTCAGAAAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 60 Query 34851 ATTAGTCGTTGCTGGTCTTGCGG 34873 || || ||||||||||| |||| Sbjct 61 ATAAGACGTTGCTGGTCGGGCGG 83 >seq7290 Length=746 Score = 82.4 bits (90), Expect = 5e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| || ||| ||||| | || || ||||| |||||||| || Sbjct 1 TCCTTCTGAATGTTATAGTCAGATAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 60 Query 34851 ATTAGTCGTTGCTGGTCTTGCGG 34873 || || ||||||||||| |||| Sbjct 61 ATAAGACGTTGCTGGTCGGGCGG 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324591289488432