Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq32 179 4e-40
seq179 125 8e-24
seq1000 102 9e-17
seq247 89.7 6e-13
seq434 84.2 2e-11
>seq32
Length=1481398
Score = 179 bits (198), Expect = 4e-40
Identities = 382/568 (67%), Gaps = 7/568 (1%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| | |||||| ||||| || | |||||||||| ||| || | ||||| |||
Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
||||| | |||||||| || || | ||| || | ||||||||| || ||||| || |||
Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
||||||||||| ||||| || || ||||| |||||||| | ||| | | | | ||
Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098
Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191
|| | ||||||||| || ||||||||||| || || | || || || || |||
Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038
Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251
|| | | || || | ||||| | | ||| || | || |||| || | ||
Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978
Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311
||| |||| ||||| ||||| || || || ||||| || || || | | ||
Sbjct 1083977 GAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCC 1083918
Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371
|| | || ||| ||||||| |||||| |||||||| | || || || || || |||||
Sbjct 1083917 TCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCT 1083858
Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAAT---GTTTTTCAT--CTGAGGTTA 19426
|| ||||| || || | ||||| ||||||| | | |||| |||| ||
Sbjct 1083857 GAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATACCGCTCATCATGGTTGAGATTG 1083798
Query 19427 ATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAG 19486
| | ||||| || | || | || | || | ||||||| ||||||| || || |
Sbjct 1083797 AAG--TTCCAGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGG 1083740
Query 19487 CCTCTGCTTTTTTATACATGTTCCATAT 19514
| | ||||| || || | | ||||||
Sbjct 1083739 CTTGAGCTTTCTTGTAGAATTGCCATAT 1083712
Score = 122 bits (134), Expect = 1e-22
Identities = 365/559 (65%), Gaps = 7/559 (1%)
Strand=Plus/Plus
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
|||||||| || || | ||| ||||| | || || | ||||| ||||| || |
Sbjct 1082047 CATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAGG 1082106
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|||||||||| |||| || || | |||||| || || || || || || || |||||
Sbjct 1082107 CCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAAG 1082166
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140
|| ||||| || || ||||| || || | | ||| ||| || | | | | | | ||
Sbjct 1082167 ATGCCTTCAACAGCAGCAAACGCCACCAAGCGTTCACCAAAAGTTG-ACCGTCGGTCGGA 1082225
Query 19141 -ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199
||||| ||||||||||| || ||||| || ||||| || || ||||| | | |
Sbjct 1082226 GATCCAGTTCAGTGCCCAGTCTGCCTTGCGCTTGACACACGGAATGGTCTCCACGGCGTC 1082285
Query 19200 AAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259
|| || ||| || || | | || || | ||| | || || | | ||| |
Sbjct 1082286 GAAAAGGTACTCGCGTTCGGCAGCGTCCTTGATATAGGTGTCGATGAGAAGCGAATACGT 1082345
Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319
||||| ||||| || || || || || || || || ||||||| || || | |
Sbjct 1082346 CTCTGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAACATCGAGCCTCGGCAAC 1082405
Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379
|| || || | |||| | ||||| | || || || || || ||||| |||||
Sbjct 1082406 TTGGACCTCGTTGGAAAAGCGCTCGACAAGGTTCTCGTTGACAATACCATCCGAGGCTGC 1082465
Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA----TGTATTCC 19435
|| || || | ||||| || ||||| || | || ||||| || |||
Sbjct 1082466 GAAGAAAGCGAGGACATGGGAGATGAAATGGCGCTCGT-TGTCGTTAAGGCGGGTGGTCC 1082524
Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495
| |||| ||||||||| || | || | ||| || | |||||||| || ||||| || |
Sbjct 1082525 AGTCATGAATATCTTTCGAGAGGTCCATTTCCTCTGCAGTCCAAAACGACGCCTCAGCCT 1082584
Query 19496 TTTTATACATGTTCCATAT 19514
| || ||||| | ||| ||
Sbjct 1082585 TCTTGTACATTTGCCAGAT 1082603
>seq179
Length=47363
Score = 125 bits (138), Expect = 8e-24
Identities = 369/568 (65%), Gaps = 7/568 (1%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| | |||||| || || |||||| || || ||||| || || | ||||| ||
Sbjct 9370 AACAAAAGACATGCGAAGTCGGTATGTAGACCTTCATCTCTGCTGATAAGCTCATTGGAG 9311
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || || || ||||||| || | ||| || | ||| || || | || || || |||
Sbjct 9310 AAAGTCAATCCTGGCATCACACCACGTTTCTTCAGCCAAAAAATGGCCGCGAAGGAACCA 9251
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
||||| || || ||||| || ||||| || || || |||| | | | |
Sbjct 9250 GAAAAAAAGATGCCTTCCACGCAGGCAAAGGCTACGAGGTGGCTTCCAAAGGCAACCGCG 9191
Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191
|| | |||||||||| ||||||||| ||||| |||| | || |||||| ||
Sbjct 9190 GAATCTTCGATCCATTTCAATGCCCAATCCGCCTTTCTTTTGATGCACTCCATTGTTTCA 9131
Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251
| | || || |||| | || || || ||| |||||| | || || | ||||
Sbjct 9130 AGCGCATCGAAGAGATGTAATCGTTCTCGGGTGTCTGCAACATAGGTGTCGATGAGTAAA 9071
Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311
||| |||| ||||| | ||||| || |||||||| |||||||| | | |||
Sbjct 9070 GAATACGTTTCGGAATGGACGTTTTCGATCATAATCTGAAAACCGTAAAACGAGCGAGCT 9011
Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371
|| | | ||| | ||| || ||| || | ||||| || || || || |||
Sbjct 9010 TCCAAAGGCCCAATTTCGCAACAGAAGTTTTGTACAAGGTTTTCGTTCACGATGCCGTCA 8951
Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTG-----AGGTTA 19426
|| ||||||||||| | ||||| | || ||| ||| | || ||| |
Sbjct 8950 GACGCAGCAAAAAATGCAAGGACATGGGTGATGAAAAACCGTTCGTTTGCTGAAAGGCGA 8891
Query 19427 ATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAG 19486
|| | ||||||||||| ||| ||||| | ||| || || ||||||||||| |
Sbjct 8890 --GTCTCCCAATCATTAAGATCGGACCGCAAATCGAGTTCATCGACCGTCCAAAAAGACG 8833
Query 19487 CCTCTGCTTTTTTATACATGTTCCATAT 19514
| || |||| || ||||| |||| ||
Sbjct 8832 CTTCGGCTTGCTTGTACATCATCCACAT 8805
>seq1000
Length=18647
Score = 102 bits (112), Expect = 9e-17
Identities = 363/560 (65%), Gaps = 7/560 (1%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| ||| || || || || ||| || |||||||| | ||| ||||||||||| ||
Sbjct 12410 AACAGCAAGCACGCGAAGTCGGTATGGAGGCCCTCGTCACAACTGATCAATTCATTGGAG 12351
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || || |||||||| || |||| || || | ||| || |||| |||||||| ||
Sbjct 12350 AAAGTCAATCCAGGCATGAGCCCTCGCTTCTTGATCCAAAAGATAGCTGCAAATGAGCCG 12291
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
|||||||| || ||||| || | ||| || | || | || | ||| | | |
Sbjct 12290 GAAAAGAAAATGCCTTCAACACAGGAAAATGCCAAAAGACGCTCAGC-GAACGACCGCGA 12232
Query 19132 TTATTATG-AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTC 19190
| | ||||||| ||| ||||| || |||||||| || || || |||| || ||
Sbjct 12231 GCGGTCGGTAATCCATGTCATCGCCCATTCTGCCTTCTTCTTCACGCAAGGCACAGTTTC 12172
Query 19191 TATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA 19250
|||| || || || | ||| | | ||| | | || | || || || ||
Sbjct 12171 GATAGCGTTGAAAAGTAAGGCCTTCTCCTTGGGATCGGTGATGTAGGTGTCGATTAACAA 12112
Query 19251 ACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGC 19310
||| |||| ||||||| |||||| || | ||| || | || ||| | ||
Sbjct 12111 GGAGTATGTTTCAGAATGAACATTTTCAATCATGACCTGGAAGGCATAGAAAGCCCAAGC 12052
Query 19311 TTCTGTTATCTGTACTTCACTA-CAAAATCTTTCGACCAAATTTTCATTAACTATTCCAT 19369
|||| | | || || | | |||| |||| | ||| || || || || |||||||
Sbjct 12051 TTCTCTCGGCGAAACCTCCTGAGCGAAAT-TTTCCAGCAAGTTCTCGTTGACAATTCCAT 11993
Query 19370 CACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTA-AT 19428
| || |||||||| || || || ||| || ||| |||| | || || | |
Sbjct 11992 CGGACGCCGCAAAAAAAGCCAACACGTGTGAAAGGAAAGACCTTTCGCCAGAAGTCAGGT 11933
Query 19429 G--TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAG 19486
| | |||| || | || || | | ||||| ||| || ||||||||||| |
Sbjct 11932 GATTTGTCCAGTCGACGACGTCGTTCGCCAGATCTAATTCATCTGTCGTCCAAAAAGATG 11873
Query 19487 CCTCTGCTTTTTTATACATG 19506
| || |||| ||| ||||||
Sbjct 11872 CTTCGGCTTGTTTGTACATG 11853
>seq247
Length=45445
Score = 89.7 bits (98), Expect = 6e-13
Identities = 176/257 (68%), Gaps = 5/257 (2%)
Strand=Plus/Plus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| | ||| ||||| || ||| ||||| |||||||| || || | ||| || |||
Sbjct 37324 AACAATAGACAGGCAAAGTCCGTATGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAA 37383
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| ||||| || ||||| || || | ||| || | ||| || | | ||||| |||||
Sbjct 37384 AAAGTTAAGCCTGGCATAAGCCC-CGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCG 37442
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
|| ||||| || ||||| || ||||| ||||| | | ||| | | || |
Sbjct 37443 GAGAAGAAAATGCCTTCCACACACGCAAAGGCAACCAAACGTTCGGGAAAG--AGGCGGA 37500
Query 19132 TT--ATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189
|| || || ||||||||||| |||||| | || || | | | ||| || || ||||
Sbjct 37501 TTGGATCATTAATCCATTTCAATGCCCAGTTCGCTTTTTCCTGGATACAGGGAATAGTCT 37560
Query 19190 CTATAGAATTAAATAGA 19206
| |||| || || |||
Sbjct 37561 CGATAGCGTTGAAGAGA 37577
>seq434
Length=244965
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 48222 TCTGGTATCCAAAGAGC-TATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATT 48280
|| || ||||| || || || ||| | ||| || | || |||||| |||||| |||
Sbjct 87313 TCAGGGATCCACAGCGCGTAGAAA-AGATCTCTTGCCCTAGATTCTTCCTTGCCATGATT 87371
Query 48281 CCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCAT 48340
| | | || || || || | | |||||||||||| ||||| | || || || |
Sbjct 87372 CTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGATCGCGAA 87431
Query 48341 TACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCT 48400
| | |||||||| || || ||||||||||| | || | ||||| | |||| | |
Sbjct 87432 TGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCAGTGGCATCATAAGCACG 87491
Query 48401 TAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448
| |||||| || || |||||||| ||||||||| || | ||| ||
Sbjct 87492 AAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCCAGCAATGTA 87539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562033660106160
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