Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq9840 91.5 1e-12 >seq9840 Length=425 Score = 91.5 bits (100), Expect = 1e-12 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 ||| ||||| || || ||||||||||| || | ||| |||||||| ||||| ||||| || Sbjct 417 ATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTT 358 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAA 563437 ||||| ||||| || || || || ||||| | | || | | |||||| || | Sbjct 357 GTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAG-GATTCGACTTCGAGGGTGA 299 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || |||||||| |||||||| ||||| Sbjct 298 TGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCAT 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028730453050060