Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq9840 109 4e-18 seq9205 89.7 3e-12 >seq9840 Length=425 Score = 109 bits (120), Expect = 4e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| ||||| || |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 417 ATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTT 358 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| || || ||||| || |||||||| | | | ||| ||||| || Sbjct 357 GTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGAT 298 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| || |||||||| || Sbjct 297 GGTCTTGCCTGTCAGAGTTTTGACGAAAATCTG 265 >seq9205 Length=338 Score = 89.7 bits (98), Expect = 3e-12 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 480628 GCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCT 480687 |||| ||||||||||| | || ||||| |||| | ||| || |||||||| ||||||| Sbjct 1 GCTTCCCAGCAAAAATCAAGCGCTGTTGGGCAGGGGCAATACCCTCCTTGTCCTGAATCT 60 Query 480688 TTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCG 480746 | |||||| || ||||| || | || | | ||||||||||| || || || Sbjct 61 TCGCCTTGACATTATCGATAGTGTCCGATGATTCGA-CCTCAAGGGTAATGGTCTTTCCC 119 Query 480747 GTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||| ||||||||||| Sbjct 120 GTGAGCGTCTTGACGAAAATTTG 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267720482452712