Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq9840 93.3 8e-14 >seq9840 Length=425 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || ||||||||||| | | ||||||||||| || || ||||| || ||||| ||| Sbjct 407 TGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGGATT 348 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | || | || ||||||||||| || || ||||| || || || || || ||| Sbjct 347 TTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTGCCT 288 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || ||||| Sbjct 287 GTCAGAGTTTTGACGAAAATCTGCAT 262 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | ||| || || || || || || | |||| | Sbjct 248 CGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCG 189 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || ||||| ||||||| | ||| ||||| ||||| || || || ||| Sbjct 188 TCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTA 129 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | ||| || || ||||||||||| ||||| || || || Sbjct 128 TCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATC 69 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || | || || ||||| || ||||| Sbjct 68 GTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899534138698080