Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq32 91.5 3e-13 seq925 84.2 4e-11 >seq32 Length=1481398 Score = 91.5 bits (100), Expect = 3e-13 Identities = 164/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 49820 TAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGT 49879 || |||||| ||||| || || || |||||||| | | |||| ||||| ||| || Sbjct 1084272 TAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAAAATGT 1084213 Query 49880 TAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAA 49939 | || ||||| | || | || || | ||| |||||||| ||||| | |||||| Sbjct 1084212 CAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCAGAAAA 1084153 Query 49940 GAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATC 49999 |||||| || |||||| ||||| || | || | | | | || || | | | || Sbjct 1084152 GAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGTTTGTC 1084093 Query 50000 TAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 50059 | | ||||| |||| ||||||||| ||||| ||||| |||| || | ||||| || Sbjct 1084092 TGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCTATGGC 1084033 >seq925 Length=43645 Score = 84.2 bits (92), Expect = 4e-11 Identities = 178/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 49815 TATATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTA 49874 |||| | ||| || ||||| || || | |||||| || | |||| || || Sbjct 13676 TATAACATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCG 13735 Query 49875 AAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTA 49934 || | || ||||||||| || || || || || | |||||| || | || || | Sbjct 13736 AACGATAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCG 13795 Query 49935 GAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTA 49994 |||||||| || || || || || || || || | | || | | || ||| || || Sbjct 13796 GAAAAGAAAATCCCTTCTACGCATGCGAAAGCCAACAATCGTTCACCGAACGTTCTTTCC 13855 Query 49995 TCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCT 50054 || || ||||||| | | |||||||||||||||||| || | |||| || |||| Sbjct 13856 TCGTCAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCC 13915 Query 50055 ATAGCTTTAAATAATTCAtttttttC 50080 || || || |||| ||| || |||| Sbjct 13916 ATCGCATTGAATAGTTCGCTTCTTTC 13941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984345109626900