Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq247 86.0 1e-11 >seq247 Length=45445 Score = 86.0 bits (94), Expect = 1e-11 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 39122 TAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGT 39181 || ||| ||||| |||||||| | |||||||| || || | ||| || |||||| Sbjct 37329 TAGACAGGCAAAGTCCGTATGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAAAAAGT 37388 Query 39182 TAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAA 39241 ||| |||||||| || || | || |||| |||||| | || |||||| | || || Sbjct 37389 TAAGCCTGGCAT-AAGCCCCGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCGGAGAA 37447 Query 39242 GAATATACCCTCCACACACGCAAATGC 39268 ||| || || |||||||||||||| || Sbjct 37448 GAAAATGCCTTCCACACACGCAAAGGC 37474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905015005945200