Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq9840 109 5e-19 >seq9840 Length=425 Score = 109 bits (120), Expect = 5e-19 Identities = 120/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || |||||||| ||| || || Sbjct 262 ATGCAGATTTTCGTCAAAACTCTGACAGGCAAGACCATCACCCTCGAAGTCGAATCCTCC 321 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| ||||||||||| ||||| || || || ||||| Sbjct 322 GATACTATCGACAACGTCAAGGCGAAA-ATCCAAGACAAGGAAGGGATTCCGCCTGATCA 380 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||||||| | || |||||||| || ||||| |||||| Sbjct 381 ACAACGTCTCATTTTTGCCGGCAAGCAGCTTGAGGAT 417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || | ||||| || || || ||||| ||||| || | || Sbjct 34 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACGCTGGAAGTGGAGTCTTCC 93 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || || || || || || ||||||||||| Sbjct 94 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCCGATCAG 153 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || ||||| || || || ||||| ||| | || ||||| ||| Sbjct 154 CAGCGCCTAATTTTCGCCGGCAAGCAACTCGAGGACGGTCGAACTCTTTCTGATTACAAC 213 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 214 ATCCAGAAGGAGTCAACGCTCCA 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449837459938320