Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2021 100 2e-16 seq9206 96.9 2e-15 seq7290 91.5 1e-13 seq7289 87.8 1e-12 seq1422 84.2 1e-11 seq1421 84.2 1e-11 seq106 82.4 5e-11 >seq2021 Length=7336 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||| ||||| |||||||||||||||||| || || ||||| | | ||| | || |||| Sbjct 265 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 206 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 ||||| ||||| ||||| || || |||||||| | || | |||||||| || | | Sbjct 205 ACTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 146 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | || || || | |||| || | |||||| || | || || ||||||| Sbjct 145 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 86 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| | ||||| || ||||| ||||| Sbjct 85 CCGTCAAAGTCTTCACGAAGATTTGCAT 58 >seq9206 Length=299 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||||||||| || || || || |||| |||| ||||| Sbjct 173 AGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAGC 114 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||||||||||||||||| || || ||||| | || | ||||||||||| Sbjct 113 TGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTC 61 >seq7290 Length=746 Score = 91.5 bits (100), Expect = 1e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||||||||| |||||| | || | || || || ||||||||||||||| Sbjct 1 TCCTTCTGAATGTTATAGTCAGATAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 60 Query 34847 ATCAGTCGTTGCTGGTCTTGCGG 34869 || || ||||||||||| |||| Sbjct 61 ATAAGACGTTGCTGGTCGGGCGG 83 >seq7289 Length=746 Score = 87.8 bits (96), Expect = 1e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||||||||| || ||| | || | || || || ||||||||||||||| Sbjct 1 TCCTTCTGAATGTTATAGTCAGAAAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 60 Query 34847 ATCAGTCGTTGCTGGTCTTGCGG 34869 || || ||||||||||| |||| Sbjct 61 ATAAGACGTTGCTGGTCGGGCGG 83 >seq1422 Length=2909 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| |||| ||| ||||||||||| ||||| || ||| | ||| |||| Sbjct 2837 AGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCT 2778 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || || ||||| ||||| |||||||| || || ||||| |||| Sbjct 2777 TCAAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGG 2734 >seq1421 Length=2902 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| |||| ||| ||||||||||| ||||| || ||| | ||| |||| Sbjct 2830 AGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCT 2771 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || || ||||| ||||| |||||||| || || ||||| |||| Sbjct 2770 TCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGG 2727 >seq106 Length=225739 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||| || ||||| ||||| ||| |||| |||| Sbjct 79691 AGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCC 79750 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| |||||||||||||| || |||||||| Sbjct 79751 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 79788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325650351439586