Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq9206 89.7 1e-12 seq2021 86.0 1e-11 >seq9206 Length=299 Score = 89.7 bits (98), Expect = 1e-12 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 |||||||||||||||||| |||||||||| | ||| | | ||||||||| | ||||| Sbjct 97 ATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACTCTTTCTGATTACAACATTCAGAAG 156 Query 206359 GAGTCTACTCTTCACCTTG 206377 ||||| ||||||||||||| Sbjct 157 GAGTCCACTCTTCACCTTG 175 Score = 87.8 bits (96), Expect = 4e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 204765 CAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCA 204824 ||||||||||||| ||||| ||||| | || || |||| | ||| | |||||||||| Sbjct 175 CAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 116 Query 204825 GCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||||||||||| | || ||||| Sbjct 115 GCTGCTTTCCGGCGAAGATCAAGCGCTGTTG 85 >seq2021 Length=7336 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| |||||||| |||||||| || ||| || || | || || ||| Sbjct 82 ACGGGAAAGACGATCACGTTGGAAGTCGAGTCTTCGGATACGATTGACAATGTGAAGGCG 141 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || ||| || ||| || | || ||||| ||||| ||| Sbjct 142 AAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTCATCTTTGCCGGGAAG 201 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| || || | |||||| | |||||||| | ||||| ||| || |||||| Sbjct 202 CAGTTGGAGGACGGGCGTACTTTGTCGGATTACAATATTCAGAAGGAGAGCACCCTTCAC 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181658870607174