Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1421 87.8 2e-12 seq1422 84.2 2e-11 seq247 82.4 7e-11 >seq1421 Length=2902 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| |||||||||||||| | ||||||| |||||||||||| || |||| | Sbjct 2812 GACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCGAGCTGCTTCCCGGCA 2753 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| ||||||||||| || || || |||| Sbjct 2752 AAGATCAGACGCTGTTGGTCGGGCGGGATGC 2722 >seq1422 Length=2909 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| |||||||||||||| | ||||||| |||||| ||||| || |||| | Sbjct 2819 GACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCAAGCTGCTTCCCGGCA 2760 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| ||||||||||| || || || |||| Sbjct 2759 AAGATCAGACGCTGTTGGTCGGGCGGGATGC 2729 >seq247 Length=45445 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 47081 GGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGT 47139 |||| | || || || ||| | || |||||| ||| || ||| | ||||| | | Sbjct 37190 GGCGTTACCTGTTGCTTTGATCGGTATGAACA-ACACCCTTATGAAGCAGTATATCGCTT 37132 Query 47140 TTGTGGCGGATCGTCTG-TTGGTGCAGCTCGGACAACCGAAATATTTTA-ATGCTCGTAA 47197 ||||||||||||||||| ||| || ||| ||| || | ||| |||| | | | || Sbjct 37131 TTGTGGCGGATCGTCTGCTTGAAGC-GCTGGGAGAATC-AAAGATTTACCACGTTGCGAA 37074 Query 47198 TCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACG 47257 || ||||| || ||| | | |||||||| ||||| || || || ||||| |||||||| Sbjct 37073 CCCCTTTGATTTCATGGATATGATTTCGCTGGAGGGTAAGACAAACTTTTTTGAGAAACG 37014 Query 47258 AGTCGGAGAGTATAA 47272 |||||| || || || Sbjct 37013 AGTCGGGGAATACAA 36999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476547488997840