Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2021 141 8e-29 seq9840 122 8e-23 seq9205 91.5 1e-13 >seq2021 Length=7336 Score = 141 bits (156), Expect = 8e-29 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 |||| || | || |||||||| ||||| |||||||| | ||| || ||| |||| |||| Sbjct 265 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 206 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 |||||| || ||||| || | ||||||||||| | ||||| || |||||| ||| | Sbjct 205 ACTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 146 Query 35649 TCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTAC 35708 |||| ||||| | | | | ||| || || || || |||| ||||||||| || | Sbjct 145 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 86 Query 35709 CCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||||| ||||| || || ||||| Sbjct 85 CCGTCAAAGTCTTCACGAAGATTTGCAT 58 >seq9840 Length=425 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | ||||| |||| || || ||||| || || || Sbjct 225 CTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAA 166 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | ||||| || |||||| ||| |||||| ||| | | | Sbjct 165 AATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATT 106 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || ||||| |||| ||||||||| || || ||||| || ||||| Sbjct 105 GTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCAC 46 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 45 AAAAATCTGCAT 34 >seq9205 Length=338 Score = 91.5 bits (100), Expect = 1e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| ||||||| | || || |||| || |||||||| ||||| || Sbjct 237 CTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 296 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 ||||| ||||||||||||| |||| | |||||||||| Sbjct 297 GATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450733340165520