Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq9840 131 2e-25 seq106 84.2 2e-11 seq9278 82.4 8e-11 >seq9840 Length=425 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || ||||| || ||||| || |||||||| || | Sbjct 260 CCACCACGGAGGCGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 201 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| ||||| || ||||| || ||||| | |||||||||||||| || Sbjct 200 AGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGA 141 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| ||| ||||| ||| | |||||||| || ||||| Sbjct 140 ATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACT 81 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||| || || || || ||||| ||||| Sbjct 80 TCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 >seq106 Length=225739 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| |||||||| ||||||||||||| | |||| || || || ||||| Sbjct 79699 GTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCCAGCTG 79758 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTAT 134608 ||||| || || |||| ||||||||| ||||| || || Sbjct 79759 CTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGAT 79797 >seq9278 Length=305 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || || || ||||| |||||||| || ||| || ||| | ||| |||| Sbjct 188 CGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGA 247 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||| ||||| ||||| ||||||||||| || || || || ||||| || || || || Sbjct 248 GCTGCTTGCCCGCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTG 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505330840868880