Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3971 172 2e-37 seq3972 168 2e-36 seq9840 159 1e-33 seq2021 132 1e-25 seq925 95.1 4e-14 seq1422 93.3 1e-13 seq776 89.7 2e-12 seq9278 87.8 5e-12 seq1421 87.8 5e-12 seq9205 84.2 7e-11 >seq3971 Length=6525 Score = 172 bits (190), Expect = 2e-37 Identities = 259/368 (70%), Gaps = 0/368 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 |||||||||||||| || ||||| | | || |||||||| | ||||||| ||||| | Sbjct 6459 CCCGAAGAAATTTCTTCCATGGTCCTCCTCAAGATGAAGGAGACTGCTGAATCATATCTC 6400 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || | ||||| |||||||| || || || ||||| || |||| ||| Sbjct 6399 GGCGTTCCGACAAACAACGCTGTCATTACTGTCCCCGCGTACTTTAACGACTCCCAACGT 6340 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || |||||||| || |||| || |||| | || || || |||| || || || Sbjct 6339 CAAGCCACAAAAGACGCCGGCACGATCTCGGGTATGAACGTGCTTCGAATCATCAACGAG 6280 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || ||||| || || || | | || | || || | Sbjct 6279 CCCACGGCCGCTGCTATCGCCTATGGTCTCGACAAGAAGGTTGTCGGCGAGCGCAACGTC 6220 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || ||| | ||||| || ||||| ||||| || || || || | || ||||| Sbjct 6219 CTCATCTTCGATCTCGGTGGAGGAACTTTCGATGTTTCTCTCCTGACGATCGAGGAGGGT 6160 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || ||||| || ||||| || || |||||| | ||||| || ||||| |||||| Sbjct 6159 ATCTTCGAGGTTAAGGCTACTGCCGGAGACACACATTTGGGTGGTGAGGATTTCGATAAT 6100 Query 349892 CGTCTCGT 349899 || ||||| Sbjct 6099 CGCCTCGT 6092 >seq3972 Length=6428 Score = 168 bits (186), Expect = 2e-36 Identities = 258/368 (70%), Gaps = 0/368 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||||||||| || || ||||| | | || |||||||| | ||||||| | ||| | Sbjct 6362 CCCGAAGAAATCTCTTCCATGGTCCTCCTCAAGATGAAGGAGACTGCTGAATCTTATCTC 6303 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || | ||||| |||||||| || || || || || || |||||||| Sbjct 6302 GGCGTTCCGACAAACAACGCTGTCATTACTGTCCCCGCGTACTTCAACGACTCCCAGCGT 6243 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || ||||||||||| |||| || |||| | || || || | || || || || Sbjct 6242 CAAGCCACAAAAGATGCCGGCACGATCTCGGGTATGAACGTGCTTCGTATTATCAACGAG 6183 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || ||||| || || || | | || | || || | Sbjct 6182 CCCACGGCCGCTGCCATCGCCTATGGTCTCGACAAGAAGGTTGTCGGCGAGCGCAACGTC 6123 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || ||| | ||||| || ||||| ||||| || || || || | || ||||| Sbjct 6122 CTCATCTTCGATCTCGGTGGAGGAACTTTCGATGTTTCTCTCCTGACGATCGAGGAGGGT 6063 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || ||||| || ||||| || ||||||||||| ||||| || ||||| ||||| Sbjct 6062 ATCTTCGAGGTTAAGGCTACTGCCGGAGATACACATCTGGGTGGTGAGGATTTCGATAAC 6003 Query 349892 CGTCTCGT 349899 || ||||| Sbjct 6002 CGCCTCGT 5995 >seq9840 Length=425 Score = 159 bits (176), Expect = 1e-33 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| ||||| || || ||||| || || || || ||||| Sbjct 264 CATGCCACCACGGAGGCGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATC 205 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | ||||| || || || ||||| || || || || ||||| || |||||||| || Sbjct 204 AGAAAGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGG 145 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || ||||||||||| || || || ||||| || || | || || | || Sbjct 144 AGGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTC 85 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | ||||| ||||| | ||| || |||||||||||||| Sbjct 84 CACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Score = 120 bits (132), Expect = 9e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||| Sbjct 425 GTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATC 366 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 ||||| || || || ||||| || || || || || || | ||| || | ||| ||||| Sbjct 365 CCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCG 306 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | ||||| || || || ||||| || ||||||||||| Sbjct 305 AGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCAT 262 >seq2021 Length=7336 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| || ||| || |||||||| ||||| || || || ||||| || || | Sbjct 264 CAAG-TGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 206 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 || || || |||||||| || || ||||| ||||||||||| || || |||||||||| Sbjct 205 ACTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 146 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| ||||||| ||| || | || ||||| | || | ||||||| Sbjct 145 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 86 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || || || || ||||| Sbjct 85 CCGTCAAAGTCTTCACGAAGATTTGCAT 58 >seq925 Length=43645 Score = 95.1 bits (104), Expect = 4e-14 Identities = 171/247 (69%), Gaps = 5/247 (2%) Strand=Plus/Plus Query 223698 ATACA-GCAAATTCTGTATGTAATGCCTCATCTCT--TGATATTAATTCATTTGAAAATG 223754 ||||| || || ||||| || | ||||||||| ||||| | || |||| || | Sbjct 13682 ATACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATA--AGCTCGTTTGCGAACG 13739 Query 223755 TTAATCCAGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaa 223814 || ||| ||||| ||||| || || |||| |||||| || ||| || | || |||| Sbjct 13740 ATAGTCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAA 13799 Query 223815 aaaaTATACCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGT 223874 | || || |||||||| || || || || | |||||| | || || || | || Sbjct 13800 AGAAAATCCCTTCTACGCATGCGAAAGCCAACAATCGTTCACCGAACGTTCTTTCCTCGT 13859 Query 223875 CTCCTATCCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAG 223934 | |||||| | || |||||||||||||||||||| | |||| || |||| | | Sbjct 13860 CAGTTATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCATCG 13919 Query 223935 CATTAAA 223941 |||| || Sbjct 13920 CATTGAA 13926 >seq1422 Length=2909 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || ||||||||||| || |||||||| ||||| || || || Sbjct 2856 CATACCGCCGCGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTC 2797 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || |||||||||||||| || || || |||||||| ||||| || || || || Sbjct 2796 TGAGAGGGTACGCCCATCTTCAAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGG 2737 Query 140627 AGGAAT 140632 || || Sbjct 2736 CGGGAT 2731 >seq776 Length=169263 Score = 89.7 bits (98), Expect = 2e-12 Identities = 197/292 (67%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || || || ||| | || ||| || || |||||||||||| ||| || Sbjct 151778 GTCCCTGCGTACTTCAACGATTCGCAACGTCTGGCCACCAAAGATGCTGGCGCCATCGCT 151837 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||||| | || || || || ||||| ||||| || ||||| || || ||| Sbjct 151838 GGTCTCGATGTTCTCCGTATCATCAACGAGCCCACGGCTGCTGCTATTGCCTACGGCCTT 151897 Query 349742 GATAAAATGAGTGACCAA----GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 | | | ||| || || || || | || || || ||| | || || || || Sbjct 151898 G----ACCGTCAGACAAAAGCGGAGAAGAACGTGCTCATCTTCGATCTCGGCGGAGGAAC 151953 Query 349798 TTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 ||| |||||||| || || |||| | || || | || | || || || ||||| | Sbjct 151954 TTTCGATGTATCCCTGCTCAACATCAGCGGA-GGTGTGTTCGCCGTCAAGGCCACTGCCG 152012 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908 |||| || ||| | ||||| |||||||| || ||| |||| | |||||| Sbjct 152013 GTGACACCCATTTGGGTGGTGAAGATTTCGACAATGCTCTCTTGGAGCATTT 152064 >seq9278 Length=305 Score = 87.8 bits (96), Expect = 5e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| ||||||||||| || ||||| |||||||| || | || ||||| || || || Sbjct 190 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 249 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647 || || || |||||||| | ||| || || || || ||||| || || || ||||| Sbjct 250 TGCTTGCCCGCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTG 305 >seq1421 Length=2902 Score = 87.8 bits (96), Expect = 5e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || ||||||||||| || |||||||| ||||| || || || Sbjct 2849 CATACCGCCGCGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTC 2790 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || ||||||||||| || || || || |||||||| ||||| || || || || Sbjct 2789 TGAGAGGGTACGCCCATCTTCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGG 2730 Query 140627 AGGAAT 140632 || || Sbjct 2729 CGGGAT 2724 >seq9205 Length=338 Score = 84.2 bits (92), Expect = 7e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| ||||||||||| || ||||| |||||||| || | || || || || || || Sbjct 223 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGC 282 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647 || || || || ||||| | ||| ||||| || || ||||| || || || ||||| Sbjct 283 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515046784577282