Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9840 149 5e-31 seq9206 84.2 2e-11 >seq9840 Length=425 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||||||| | || || || |||||||| | ||| Sbjct 34 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACGCTGGAAGTGGAGTCTTCC 93 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| ||||| || || || ||||| || |||||||| Sbjct 94 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCCGATCAG 153 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| |||| | ||||||||| ||| | || ||| || || |||| ||||||||| Sbjct 154 CAGCGCCTAATTTTCGCCGGCAAGCAACTCGAGGACGGTCGAACTCTTTCTGATTACAAC 213 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | ||| | || | || |||||||| Sbjct 214 ATCCAGAAGGAGTCAACGCTCCATCTCGTTCTTCGCCTCCGTGGTGGCAT 263 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||||||||| |||||| | || || || ||||| ||| | || Sbjct 261 CATGCAGATTTTCGTCAAAACTCTGACAGGCAAGACCATCACCCTCGAAGTCGAATCCTC 320 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| ||||| |||||||| ||||| || || || ||||| Sbjct 321 CGATACTATCGACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGGATTCCGCCTGATCA 380 Query 27107 ACAGCGTTTAATATACGCCGGCAAACA 27133 ||| ||| | || | |||||||| || Sbjct 381 ACAACGTCTCATTTTTGCCGGCAAGCA 407 >seq9206 Length=299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || || || ||||| || | || || | ||||| | ||||| || || || ||| Sbjct 4 ATCACCCTGGAAGTCGAGTCCTCGGATACCATTGACAACGTCAAGGCCAAGATCCAGGAC 63 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || || || || || || || |||||||| || || | |||||| || || ||||||| Sbjct 64 AAGGAGGGTATCCCCCCTGACCAACAGCGCTTGATCTTCGCCGGAAAGCAGCTGGAAGAT 123 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184 || || |||| |||||||||||||| |||||||| || Sbjct 124 GGTCGCACTCTTTCTGATTACAACATTCAGAAGGAGTCCAC 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434860262282880