Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9206 149 1e-30 seq9840 140 8e-28 seq2021 120 7e-22 seq7290 113 1e-19 seq7289 113 1e-19 seq106 98.7 2e-15 seq9205 95.1 3e-14 seq451 95.1 3e-14 seq9278 93.3 1e-13 seq7286 93.3 1e-13 seq1422 93.3 1e-13 seq1421 91.5 3e-13 >seq9206 Length=299 Score = 149 bits (164), Expect = 1e-30 Identities = 138/175 (79%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||||||||| || || ||||| ||||| | ||| || | |||||||||| Sbjct 175 CAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 116 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| | ||| ||||||||||| || | || ||||||||||||| Sbjct 115 GCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGA 56 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||| || ||||| || ||||| || ||| || || || || ||||| || Sbjct 55 TCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGT 1 >seq9840 Length=425 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || ||||| || |||||||| ||||| | ||| || | || || Sbjct 245 AGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGACCGTCC 186 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||| || ||||| || || || ||||||| || ||||| ||| Sbjct 185 TCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCC 126 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || || || ||||||||||| || || || || || ||||||||| Sbjct 125 TGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCCAGCGTGATCGTC 66 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | |||||| Sbjct 65 TTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Score = 123 bits (136), Expect = 6e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || ||||||||||| || || || || |||||||| ||||| |||| |||||| Sbjct 419 CCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCC 360 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| ||||| || || ||||| ||||| || || ||| ||| || ||||| ||| Sbjct 359 TTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTG 300 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || ||||| || || || | |||||| Sbjct 299 ATGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCAT 262 >seq2021 Length=7336 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||| ||| || || || || ||||||| | || | || || |||| ||| Sbjct 261 GTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAACTG 202 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| ||||| || ||||||||||||| || ||||| ||||| ||||| Sbjct 201 CTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTT 142 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||||| || || || || || || || || || | ||||||||||||||||| Sbjct 141 CGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGT 82 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| || || | ||||| Sbjct 81 CAAAGTCTTCACGAAGATTTGCAT 58 >seq7290 Length=746 Score = 113 bits (124), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| |||||||| |||||||| |||||||| |||||| ||| |||||| Sbjct 140 CCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGGATTCGACCTCG 199 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| |||||||| ||||| ||||| || || | |||||| || Sbjct 200 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 246 >seq7289 Length=746 Score = 113 bits (124), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| |||||||| |||||||| |||||||| |||||| ||| |||||| Sbjct 140 CCTTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATGGTATCAGAGGATTCGACCTCG 199 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| |||||||| ||||| ||||| || || | |||||| || Sbjct 200 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 246 >seq106 Length=225739 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| ||||||||||| ||||||||||| || || ||||| | ||||| Sbjct 79691 AGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCC 79750 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||||||||| |||||||| || || || ||||| ||||| Sbjct 79751 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 79794 >seq9205 Length=338 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 210970 GCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029 |||| || || || || | ||| |||||| |||| | || || ||||||||||| |||| Sbjct 1 GCTTCCCAGCAAAAATCAAGCGCTGTTGGGCAGGGGCAATACCCTCCTTGTCCTGAATCT 60 Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCG 211089 | || || || ||||| ||||| || ||| ||||| || || || |||||||||| Sbjct 61 TCGCCTTGACATTATCGATAGTGTCCGATGATTCGACCTCAAGGGTAATGGTCTTTCCCG 120 Query 211090 TGAGAGTCTTTACAAACACCTGCAT 211114 |||| ||||| || || | ||||| Sbjct 121 TGAGCGTCTTGACGAAAATTTGCAT 145 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || || ||||| ||||| || || ||||||||||| | ||| || | || || || ||| Sbjct 223 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGC 282 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||| |||||||| | || || ||||| || |||| || ||||||||||| Sbjct 283 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 338 >seq451 Length=165701 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||||||||| || || ||||| |||||||||||||| || ||||| Sbjct 12524 CCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCGATGGTGTCAGACGACTCCACCTCA 12465 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| |||||||| ||||| || || | ||||| || Sbjct 12464 AGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATCTT 12418 >seq9278 Length=305 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || || ||||| ||||| || || ||||||||||| | ||| || | || || || ||| Sbjct 190 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 249 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||| || ||||| | || |||||||| || |||| || ||||||||||| Sbjct 250 TGCTTGCCCGCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTG 305 >seq7286 Length=304 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || || ||||| || |||||||| || || | || || | ||||| || Sbjct 1 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCA 60 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||| || ||||||||||||||||||||||| ||||| Sbjct 61 AGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTCGGGAGG 101 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| ||||||||||| ||| || || || |||||||| || ||||||||| Sbjct 162 CCTTCCTTATCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCCGATGACTCAACCTCG 221 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || ||||| ||||| || || | |||||| Sbjct 222 AGGGTAATCGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 265 >seq1422 Length=2909 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| ||| || || |||||||| || ||| ||| ||||| Sbjct 2678 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCA 2619 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| |||||||| || | |||||| || || | |||||| Sbjct 2618 AGAGTGATGGTCTTTCCTGTCAAAGTCTTCACGAAAATCTGCAT 2575 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || ||||| ||||| ||||||||||| || ||||| || || | ||||| Sbjct 2846 CGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTA 2787 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 | |||||||| |||||||| || || ||||| || || |||||||| || || Sbjct 2786 CGCCCATCTTCAAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGG 2734 >seq1421 Length=2902 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || ||||| ||||| ||||||||||| || ||||| || || | ||||| Sbjct 2839 CGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTA 2780 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 | |||||||| |||||||| || || ||||| || || |||||||| || || Sbjct 2779 CGCCCATCTTCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGG 2727 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| ||| || || |||||||| || ||| ||| ||||| Sbjct 2671 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCA 2612 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| |||||||| || | ||||| || || | |||||| Sbjct 2611 AGAGTGATGGTCTTTCCTGTCAAGGTCTTCACGAAAATCTGCAT 2568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158993176615310