Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq32 205 8e-48 seq925 178 1e-39 seq247 163 2e-35 >seq32 Length=1481398 Score = 205 bits (226), Expect = 8e-48 Identities = 378/554 (68%), Gaps = 3/554 (1%) Strand=Plus/Minus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 ||||||| ||| || ||||| ||||| || ||||||| ||||| || || || ||| Sbjct 1084277 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 1084218 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || || | || ||||| | ||| | || || | ||| ||||| | |||||| |||||| Sbjct 1084217 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 1084158 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT 4718 ||||||||||| ||||| || || ||||| || |||| || | |||| | | Sbjct 1084157 GAAAAGAATATCCCTTCGACAGCAGCAAAGGCAACTAGACGTTCCGCGAAGGTTGAATGT 1084098 Query 4719 TTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT 4778 |||||| ||||||||||| ||||| | |||||| ||| | ||| ||||| |||| | Sbjct 1084097 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 1084038 Query 4779 ATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838 || |||| || | | || || || | || || || || || | Sbjct 1084037 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 1083978 Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898 |||| |||| ||||| ||||| || || || ||||| || || ||| | | || Sbjct 1083977 GAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCC 1083918 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 || | ||| || ||||| |||||| ||||| || | ||| |||||||| || || || Sbjct 1083917 TCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCT 1083858 Query 4959 CTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT- 5017 ||| ||||| || || | |||||| |||||||| ||| | || ||| | || || || Sbjct 1083857 GAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATACCGCTCATCATGGTTGAGATTG 1083798 Query 5018 --TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075 ||||||| || || | | | |||| ||||||| | ||||| || || ||| Sbjct 1083797 AAGTTCCAGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGGCT 1083738 Query 5076 TCCGCTTTTTTGTA 5089 | ||||| ||||| Sbjct 1083737 TGAGCTTTCTTGTA 1083724 Score = 145 bits (160), Expect = 7e-30 Identities = 357/536 (67%), Gaps = 9/536 (2%) Strand=Plus/Plus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| |||||||| | |||||| || || || ||||| || | || ||||| || ||| Sbjct 1082062 TGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAGGCCAGGCATCAAGCCT 1082121 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || | ||| || || | || || || || || ||||| |||||||| || || Sbjct 1082122 CGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAAGATGCCTTCAACAGCA 1082181 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT--GTCTTTAATCCATTTTAATG 4740 |||||||| || || || || || || || | | ||| ||||| || | || Sbjct 1082182 GCAAACGCCACCAAGCGTTCACCAAA--AGTTGACCGTCGGTCGGAGATCCAGTTCAGTG 1082239 Query 4741 CCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTT 4800 |||||| || || ||| || |||||||| || | | |||| || || |||| Sbjct 1082240 CCCAGTCTGCCTTGCGCTTGACACACGGAATGGTCTCCACGGCGTCGAA-AAGGTACTCG 1082298 Query 4801 T-TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATA 4859 ||| | ||| | ||||| ||||| || || || |||| | || || || || Sbjct 1082299 CGTTCGGCAGCGTCCTTGATATAGGTGTCGATGAGAAGCGAATACGTCTCTGAGTGAATG 1082358 Query 4860 TTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTA 4919 || || || || || || || || || |||| ||| || | ||||| || ||||| Sbjct 1082359 TTCTCCATCATGATTTGGAAGCCATAGAAACATCGAGCCTCGGCAACTTGGACCTCGTTG 1082418 Query 4920 CAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAA 4979 |||| | || || | ||| ||||| || ||||| || |||||| || || || | Sbjct 1082419 GAAAAGCGCTCGACAAGGTTCTCGTTGACAATACCATCCGAGGCTGCGAAGAAAGCGAGG 1082478 Query 4980 ACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTT---TTTTCCAGTGGGGCAAATCT 5036 ||||| || || || | | |||| ||||| | |||||| | | |||| Sbjct 1082479 ACATGGGAGATGAAATGGCGCTCGTTGTCGTTAAGGCGGGTGGTCCAGTCATGAATATCT 1082538 Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | | || | ||| || |||||||||||||||| || || || |||||||| Sbjct 1082539 TTCGAGAGGTCCATTTCCTCTGCAGTCCAAAACGACGCCTCAGCCTTCTTGTACAT 1082594 >seq925 Length=43645 Score = 178 bits (196), Expect = 1e-39 Identities = 377/558 (68%), Gaps = 5/558 (1%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 |||||| ||||| || | ||| || |||| ||| || || ||||| | |||| || Sbjct 13684 ACACGCGAAATCTGTGTGAAGACCCTCATCTCGGCTGATAAGCTCGTTTGCGAACGATAG 13743 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 ||| ||||| ||||| || || || | |||||| || ||||| ||||| || |||||||| Sbjct 13744 TCCTGGCATCAAACCCCTTTTCTTCAACCAAAAGATCGCGGCGAATGAGCCGGAAAAGAA 13803 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 || ||||||||| || || || | ||||| ||||||| || | | ||| | Sbjct 13804 AATCCCTTCTACGCATGCGAAAGCCAACAATCGTTCACCGAACGTTCTTTCCTCGTCAGT 13863 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 ||||| | || ||||| | ||||||||||| ||||| |||||||| | || || || Sbjct 13864 TATCCAAGTCAAAGCCCAATCTGCTTTTTTCTTCACGCAAGGAATTGTTTCCATCGCATT 13923 Query 4787 AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846 |||| || ||| |||| ||| | |||||| |||| || | || ||||| Sbjct 13924 GAATAGTTCGCTTCTTTCGTTGTCGTCCTTGATATAACTGTCGATCAAAAGCGAATACAC 13983 Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTAC 4906 ||| || || | ||||| || | |||||| ||||| ||| | | ||||| Sbjct 13984 TTCCGAGTGGACGTTTTCGATCATGAACTGAAAGCCGTAGAAGTAACGGGCTTCCAAAGG 14043 Query 4907 TTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGC 4966 ||||| | ||| |||| || ||||| ||||| || || || || ||||| Sbjct 14044 GCCGACTTCTTGCGCAAAGTTTTCCACCAAGTTCTCGTTCACGATTCCATCGGATGCTGC 14103 Query 4967 AAAAAACGCCAAAACATGAGATATAAAGTA-CTGTTCGT-CAGGCTTAAGT--TTTTTCC 5022 |||||| || | || | |||| | |||| | ||| |||| || | ||| | | | || Sbjct 14104 AAAAAAAGCAAGAATACGAGAAACAAAGAATCTG-TCGTCCACGGATAATTCGTCCTCCC 14162 Query 5023 AGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082 | || | | || | | || | |||||| | |||||||| || |||| || | Sbjct 14163 ATTGTGTTACGTCCCGACGAAGGTCGATTTCTTCCGCGGTCCAAAAGGATGCTTGAGCCT 14222 Query 5083 TTTTGTACATAGACCAAA 5100 |||||||||| | ||||| Sbjct 14223 TTTTGTACATCGCCCAAA 14240 >seq247 Length=45445 Score = 163 bits (180), Expect = 2e-35 Identities = 386/565 (68%), Gaps = 20/565 (4%) Strand=Plus/Plus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 ||||||| ||| ||||| || ||| | |||||||||||||| || |||||||| ||| Sbjct 37324 AACAATAGACAGGCAAAGTCCGTATGAAGTCCTTCGTCTCTGCTGATTAGTTCGTTCGAA 37383 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || ||||| || |||| ||| || | || |||| |||||| | || ||||| || || Sbjct 37384 AAAGTTAAGCCTGGCA-TAAGCCCCGTTTCTTAATCCAAAAGACTGCTGCAAACGATCCG 37442 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT 4718 || ||||| |||||||| || ||||| || || || | | | ||| ||| || | Sbjct 37443 GAGAAGAAAATGCCTTCCACACACGCAAAGGCAACCAAAC-GTTCGGGAAAGAGGCGGAT 37501 Query 4719 TTG-TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777 | | || ||||||||||| ||||||||||| ||||||| || | || ||||| || | Sbjct 37502 TGGATCATTAATCCATTTCAATGCCCAGTTCGCTTTTTCCTGGATACAGGGAATAGTCTC 37561 Query 4778 TATAGCGTTAAATA-ATTTACTTTTTTCAAATG-GGTCTTGAATATAAGTGTCTATTA-- 4833 |||||||| || | | | || | || ||| ||||||| || ||||| | Sbjct 37562 GATAGCGTTGAAGAGACGGGCCCGTTCC--GTGCTGTCACGAATATAGGTATCTATCAAG 37619 Query 4834 GTAGGCTATACATTTCAGAATGTATATTTTCTAT-AGCAATCTGAAATCCGTAAAAGCAT 4892 || | ||| | || || || | |||||| || | || || || ||||||||| Sbjct 37620 GTCGAATATGC--CTCGGAGTGAACATTTTCGATCATTGAT-TGGAAACCGTAAAAGGCA 37676 Query 4893 CTAGCTT--CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTA 4950 | || | | | || || | || | | | || | ||| | || |||||||| || | Sbjct 37677 CGGGCCTCCCAGGGAC-CGATC-TCTTGAGAGAACCGTTCCAGCAAATTTTCGTTAACGA 37734 Query 4951 TACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT-ACTGT--TCGTCAG 5007 | ||||| |||||| || || |||| ||||| || | ||| | |||| |||| | Sbjct 37735 TGCCGTCCGAGGCTGCGAAGAAGGCCAGCACATGTGACAAAAAATGTCTGTCATCGTTCG 37794 Query 5008 GCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAA 5067 | | | || | ||||| | ||||||| | | ||||| || || || ||||| | Sbjct 37795 ACAGACGGTTCTCCCAGTCGCCCAAATCTGAACGAAGATCAAGCTCCTCCACGGTCCAGA 37854 Query 5068 ACGACGCTTCCGCTTTTTTGTACAT 5092 | ||||| ||||| || || ||||| Sbjct 37855 ATGACGCCTCCGCCTTCTTATACAT 37879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426993941291102