Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9840 167 5e-36 seq2021 140 7e-28 seq9206 132 1e-25 seq9205 123 5e-23 seq32 109 1e-18 seq1422 107 4e-18 seq9278 104 5e-17 seq7289 104 5e-17 seq7290 102 2e-16 seq1421 102 2e-16 seq106 93.3 9e-14 >seq9840 Length=425 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| |||||||| || ||||| | ||| || || ||||||||||| |||| | Sbjct 260 CCACCACGGAGGCGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 201 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| ||||| || ||||| || || | || || || || ||| Sbjct 200 AGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGA 141 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || || |||||||| || || | ||||| ||||| |||| || ||| Sbjct 140 ATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACT 81 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || ||||| ||||| || || |||||||| Sbjct 80 TCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 Score = 156 bits (172), Expect = 9e-33 Identities = 133/164 (81%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 ||||| |||||||| || || || |||||||| || | ||||||||| ||| |||||| Sbjct 425 GTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATC 366 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || |||||||||||||| || || || ||| | |||||||| || || | |||||||||| Sbjct 365 CCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCG 306 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || |||| ||| || ||||| |||||||| Sbjct 305 AGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAAATCTGCAT 262 >seq2021 Length=7336 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || || || ||||| || | | || || || ||||| | || |||||| Sbjct 254 GTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAACTGCTTCCCG 195 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 |||||||| | || || |||||| ||||| |||||||| || || ||||| || || Sbjct 194 GCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTC 135 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | || || || ||||||| |||||||| | ||||||||||| |||||||||||| Sbjct 134 ACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGTCAAAGTC 75 Query 283083 TTAACGAATATCTGCAT 283099 || ||||| || ||||| Sbjct 74 TTCACGAAGATTTGCAT 58 >seq9206 Length=299 Score = 132 bits (146), Expect = 1e-25 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || |||||||| |||| ||| ||||| ||||| || || || || ||||| ||| Sbjct 158 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAG 99 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| || ||||||||| || |||||||||||||| |||||||| || || ||| | Sbjct 98 ATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 39 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || || || ||||| | |||||||| || ||||| || Sbjct 38 TCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGT 1 >seq9205 Length=338 Score = 123 bits (136), Expect = 5e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 ||||| ||||| ||||| || |||||| || | ||||||||||||||| || ||||| Sbjct 3 TTCCCAGCAAAAATCAAGCGCTGTTGGGCAGGGGCAATACCCTCCTTGTCCTGAATCTTC 62 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 || || || |||||||||||||||| | |||||| || || || || ||||| ||||| Sbjct 63 GCCTTGACATTATCGATAGTGTCCGATGATTCGACCTCAAGGGTAATGGTCTTTCCCGTG 122 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| || ||||| Sbjct 123 AGCGTCTTGACGAAAATTTGCAT 145 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||| || || | ||| |||||||| ||||| || || || || || ||| Sbjct 238 TCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAG 297 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 |||||||| || ||||| ||||||||||||||||| || Sbjct 298 ATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 338 >seq32 Length=1481398 Score = 109 bits (120), Expect = 1e-18 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || |||||||||||||| | ||| | ||||| || ||||| || || || ||| | Sbjct 1081879 CTCATTGGCATGAATGCTGACTTGATGTGTCAATACATTGAATTTGTTGCCGACCGTCTC 1081820 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || | || || |||||||||| | ||||| |||| || ||||| Sbjct 1081819 CTCGTTGCCCTCGGAAATGACAAGTTGTATAACTCGACAAACCCATTCGACTTCATGGAC 1081760 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTC 230387 | || ||||| ||||| || || ||||||||||| ||||| ||| Sbjct 1081759 ATGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGCGTC 1081715 >seq1422 Length=2909 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| ||||| || | ||||| || || || | |||||| || Sbjct 2678 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCA 2619 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 2618 AGAGTGATGGTCTTTCCTGTCAAAGTCTTCACGAAAATCTGCAT 2575 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || || || ||||| | ||| ||||| || ||||||||||| | Sbjct 2853 ACCGCCGCGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 2794 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || || || ||||| || || || |||||||||||||||| ||| |||||||| Sbjct 2793 GAGGGTACGCCCATCTTCAAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTC 2740 >seq9278 Length=305 Score = 104 bits (114), Expect = 5e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| ||||||||||| || ||||| || || ||| |||||||||||||||| | |||| Sbjct 4 GGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATAGTGTCCGACGATTCG 63 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || ||||| ||||| | ||||| ||||| || ||||| Sbjct 64 ACCTCAAGGGTAATGGTCTTTCCCGTGAGCGTCTTGACGAAAATTTGCAT 113 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||| || || | ||| ||||| || ||||| || || || || |||||| Sbjct 205 TCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCCGCAAAG 264 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 |||||||| |||||||| ||||| ||||||||||| || Sbjct 265 ATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTG 305 >seq7289 Length=746 Score = 104 bits (114), Expect = 5e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || ||||||||||||||||| || || ||| ||||||| || || || | |||||| ||| Sbjct 140 CCTTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATGGTATCAGAGGATTCGACCTCG 199 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||| ||||| || || | ||||| ||||| |||||||| || Sbjct 200 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 246 >seq7290 Length=746 Score = 102 bits (112), Expect = 2e-16 Identities = 90/111 (81%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 282993 ATACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||| |||||||||||||||| || || ||| | ||||| || || || | |||||| Sbjct 136 ATACCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGGATTCGAC 195 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||||||||| ||||| || || | ||||| ||||| |||||||| || Sbjct 196 CTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 246 >seq1421 Length=2902 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| ||||| || | ||||| || || || | |||||| || Sbjct 2671 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCA 2612 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 2611 AGAGTGATGGTCTTTCCTGTCAAGGTCTTCACGAAAATCTGCAT 2568 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || || || ||||| | ||| ||||| || ||||||||||| | Sbjct 2846 ACCGCCGCGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 2787 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || || || ||||| || || || |||||||||||||||| ||| |||||||| Sbjct 2786 GAGGGTACGCCCATCTTCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTC 2733 >seq106 Length=225739 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| |||| || | ||| || ||||||||||||||||| Sbjct 79675 ACCACCACGCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCT 79734 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || ||||| |||||||| || || || ||||| ||||||| ||| || ||||| Sbjct 79735 GAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 79788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046595779065876