Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq9840 140 3e-28 seq9278 131 2e-25 seq9205 122 8e-23 seq1421 120 3e-22 seq1422 116 3e-21 seq2021 113 4e-20 seq9206 100 3e-16 seq451 95.1 1e-14 seq106 91.5 1e-13 seq7290 87.8 2e-12 seq7289 87.8 2e-12 seq7286 86.0 6e-12 >seq9840 Length=425 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || ||||| ||||| ||||||||| ||||| || || || Sbjct 261 GCCACCACGGAGGCGAAGAACGAGATGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 202 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| ||||| |||||||||||||| || |||||||| || || | || Sbjct 201 AAGAGTTCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGG 142 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||| ||| ||| | ||||| | || | | | |||||| ||||||| Sbjct 141 AATGCCCTCCTTATCC-TGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCCA 83 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| ||| ||||| || || |||| ||||| || ||||||||||| Sbjct 82 CTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 34 >seq9278 Length=305 Score = 131 bits (144), Expect = 2e-25 Identities = 101/119 (85%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| |||||||| || |||||||||||||||||| ||||| || |||||| |||| | Sbjct 185 CACCGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCT 244 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||||||||||| || || |||| ||||||||||||| ||||| || |||||||||| Sbjct 245 CGAGCTGCTTGCCCGCAAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 303 >seq9205 Length=338 Score = 122 bits (134), Expect = 8e-23 Identities = 99/119 (83%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| |||||||| || |||||||||||||||||| ||||| || ||||| |||| | Sbjct 218 CACCGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGGCCGTCCT 277 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||||||||||| ||||| |||| ||||| ||||||| ||||| | |||||||||| Sbjct 278 CGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 336 >seq1421 Length=2902 Score = 120 bits (132), Expect = 3e-22 Identities = 100/121 (83%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| | ||| ||||| || ||| ||| ||||||||||| ||||| ||| Sbjct 2845 CCGCCGCGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAG 2786 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 ||||| ||| | || ||||||||||| ||||| || ||||| ||||||||||| ||||| Sbjct 2785 AGGGTACGCCCATCTTCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGGG 2726 Query 41755 A 41755 | Sbjct 2725 A 2725 >seq1422 Length=2909 Score = 116 bits (128), Expect = 3e-21 Identities = 99/121 (82%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| | ||| ||||| || ||| ||| ||||||||||| ||||| ||| Sbjct 2852 CCGCCGCGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAG 2793 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 ||||| ||| | || || |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct 2792 AGGGTACGCCCATCTTCAAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGGG 2733 Query 41755 A 41755 | Sbjct 2732 A 2732 >seq2021 Length=7336 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || ||||||||||||||||| || || || || | || ||| |||| || | |||| Sbjct 260 TGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAACTGC 201 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 || ||||| || || |||||||| ||||| | |||| || |||||| ||| ||| | || Sbjct 200 TTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC-TGAATCTT 142 Query 41780 TGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 || | || | | | || || ||||| || |||| ||| ||||| || ||||| Sbjct 141 CGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGT 82 Query 41839 CAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| || ||||| Sbjct 81 CAAAGTCTTCACGAAGATTTGCAT 58 >seq9206 Length=299 Score = 100 bits (110), Expect = 3e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 41653 CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 ||||| | || || ||| ||||||||||||||| || || || || ||||| | || | Sbjct 178 CACCAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTT 119 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | |||||||| |||||||| |||| |||||||||||| | ||| | | |||||||||| Sbjct 118 CCAGCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCT 59 Query 41772 TGATTTT 41778 ||| || Sbjct 58 GGATCTT 52 >seq451 Length=165701 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 41648 CGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCG 41707 |||| |||| || || || ||||||||| ||||| |||||| ||| ||||| || Sbjct 12694 CGTAGGACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCG 12635 Query 41708 TCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA 41755 || |||||||||||||| || || ||||||||||||||||| |||||| Sbjct 12634 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGCGGGA 12586 >seq106 Length=225739 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| |||||| || ||||| |||||| | Sbjct 79676 CCACCACGCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 79735 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||| | || || ||||||||||||||||| ||||| ||||| ||||| Sbjct 79736 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 79788 >seq7290 Length=746 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||||||||| || ||||| || |||| ||||||||||| |||||||| Sbjct 1 TCCTTCTGAATGTTATAGTCAGATAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 60 Query 41732 ATCAGGCGCTGTTGGTC-CGCGGGA 41755 || || || || ||||| |||||| Sbjct 61 ATAAGACGTTGCTGGTCGGGCGGGA 85 >seq7289 Length=746 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||||||||| || ||||| || |||| ||||||||||| |||||||| Sbjct 1 TCCTTCTGAATGTTATAGTCAGAAAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 60 Query 41732 ATCAGGCGCTGTTGGTC-CGCGGGA 41755 || || || || ||||| |||||| Sbjct 61 ATAAGACGTTGCTGGTCGGGCGGGA 85 >seq7286 Length=304 Score = 86.0 bits (94), Expect = 6e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || || ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 1 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCA 60 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||| || ||||| || ||||| |||||||| Sbjct 61 AGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTC 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462242201512800