Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 120 6e-22 seq255 87.8 4e-12 >seq1 Length=1832336 Score = 120 bits (132), Expect = 6e-22 Identities = 145/192 (76%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 || || ||||||||||| ||| || ||| | ||||||||||| ||||| || ||||| | Sbjct 895846 CTCATCGGCATGAACGC-GAAGTTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGTCT 895788 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | || |||||| |||||| |||||||| | ||||||||| | || ||||| Sbjct 895787 GCTGTGCGCGCTTGGTAACGAGAGGCACTACAACTCGACGAACCCCTTCGATTTCATGGA 895728 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA-TCAGA 230623 | || ||||| || || ||||||||||||||||| |||||||| ||||| || | Sbjct 895727 TATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTTTCGGACTACTCCAA 895668 Query 230624 GGCCTGGTGTGA 230635 || ||||||||| Sbjct 895667 GG-CTGGTGTGA 895657 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 230445 CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| || ||||||||||| | || ||| | || |||||||| |||||||| |||||| | Sbjct 898490 CCTAATAGGCATGAACGCCGCGCTCATGCGTCAATACATCGAGTTCGTAGCAGACCGCCT 898549 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | || || || |||| || ||| || | |||||| || | |||||||| Sbjct 898550 GCTACAGGCTCTCGGGAACGACAAGCACTACCACGCCGCGAACCCGTTCGACTTTATGGA 898609 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | || || || || |||||||| |||||||| || ||||| || || || ||||| Sbjct 898610 CATGATCTCCCTGCAGGGGAAGACAAACTTCTTTGAGAAGCGCGTGTCCGAGTACCAGAG 898669 Query 230625 G 230625 | Sbjct 898670 G 898670 >seq255 Length=1613832 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGA 281801 |||||||||||||| ||| || || |||||||| ||||| | | || || ||| Sbjct 617431 GTGAAGATATACCTCGCAGAGGCATGATCTTTACCGCCCTGATCACGAGTACCGAATTGA 617372 Query 281802 CCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACG 281861 || | ||||| | | |||| ||||| || || |||| ||| || || |||| ||||||| Sbjct 617371 CCATTCGGCATGAGCAAGTTGATGTTGTTACTGCCGATGTAGTCTTGCGCCAAGTTGACG 617312 Query 281862 ATTGTC-CCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTG--TGTTCGGCAACATAA 281918 || ||| | | || | | ||| ||||||||||| ||||| | ||||| || ||| Sbjct 617311 ATGGTCATCATCAAAC-TTTGCTCGCCGTGGTGATA--CGCTGCCTTTTCGGAAATATAG 617255 Query 281919 CCA 281921 ||| Sbjct 617254 CCA 617252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819703581710