Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 152 5e-32 >seq1 Length=1832336 Score = 152 bits (168), Expect = 5e-32 Identities = 278/407 (68%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | |||||| || ||||| || || || | || |||||| || || ||| Sbjct 895980 CCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTC 896039 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | |||||| || || || ||||| ||||||||||||| || || Sbjct 896040 TTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAG 896099 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 |||| | || |||||| | | || || |||| ||||| | | |||| ||| Sbjct 896100 GCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTCTGTGATCCAGCGCAGGGCCCAGTCG 896159 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGT 17224 || || | ||| ||||| || || || ||||| | || | | || | || Sbjct 896160 GCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGTATTCGCGCTGCTTG 896219 Query 17225 AGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATG 17284 |||| | || || || |||||||| ||| ||| | |||||||| ||||||||||| Sbjct 896220 GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATC 896279 Query 17285 GCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGT 17344 ||||| || ||||| ||||| || || || || || || || | ||||||| Sbjct 896280 ATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTGCACCTCGTTGGAGAATCGC 896339 Query 17345 TCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || | || || ||||| ||||| |||||| || ||||| || || Sbjct 896340 TCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGGC 896386 Score = 152 bits (168), Expect = 5e-32 Identities = 293/432 (68%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 |||||| || || ||| || | |||||||||| ||||| |||||||| || || || Sbjct 898313 CAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGT 898254 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 ||| || ||||| || || ||||| ||||||||||||| || || |||||||| || Sbjct 898253 CAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAA 898194 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||||||||| || ||| |||||||| | | | | | | | || ||||| Sbjct 898193 GAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTTTTGTC 898134 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | ||||| | |||| || || || ||| || || | || || || || Sbjct 898133 AGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGC 898074 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 ||| || | ||| ||| || |||| | ||||| || || ||||| | || Sbjct 898073 AGCAAACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGAATA 898014 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 | | |||||||| | ||||||||| ||||| || ||||| || || || || || || Sbjct 898013 CGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCTCGGC 897954 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 | ||| || || | |||| || || | || ||||||||||||||||||||| || Sbjct 897953 GACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCGGAGGC 897894 Query 17380 GGCGAAAAACGC 17391 |||||| || || Sbjct 897893 GGCGAAGAAGGC 897882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543549225560