Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=1832336 Score = 111 bits (122), Expect = 2e-19 Identities = 276/416 (66%), Gaps = 6/416 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 |||||||| |||||| || | || ||||||| ||||| |||||||| || ||||| Sbjct 898312 AGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTC 898253 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 || |||||||| || || ||||| ||||| ||||||| ||||| ||||| || ||| Sbjct 898252 AAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAAG 898193 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC---GTACGTAGCATCTTTA 16375 |||||||| || || ||||| || | | | || | | |||| | | ||| Sbjct 898192 AATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGT--CCT-TTTG 898136 Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435 | | ||||| | |||| || || || || ||||| | || || || Sbjct 898135 TCAGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATC 898076 Query 16436 GCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495 || |||||| | ||| ||| | || | ||||| || ||||| || || Sbjct 898075 GCAGCAAACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGAA 898016 Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 ||| | || ||||| | |||||| || ||||| || || ||||| || || ||||| Sbjct 898015 TACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 || | ||| || || | | || || || | ||||| || |||||||| ||||| Sbjct 897955 GCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTC 897900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412373520440